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    GNLY granulysin [ Ovis aries (sheep) ]

    Gene ID: 100125622, updated on 9-Feb-2019

    Summary

    Gene symbol
    GNLY
    Gene description
    granulysin
    See related
    Ensembl:ENSOARG00000002036
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Ovis aries
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis

    Genomic context

    See GNLY in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Oar_rambouillet_v1.0 (GCF_002742125.1) 3 NC_040254.1 (61603301..61605778)
    102 previous assembly Oar_v4.0 (GCF_000298735.2) Unplaced Scaffold NW_014639859.1 (10315..12737, complement)

    Chromosome 3 - NC_040254.1Genomic Context describing neighboring genes Neighboring gene antimicrobial peptide NK-lysin Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene uncharacterized LOC114113594 Neighboring gene atonal bHLH transcription factor 8

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sheep Tissue Atlas
    • Description: Sheep total RNA was extracted from embryonic and adult tissues
    • BioProject: PRJEB6169
    • Publication: PMID 24904168
    • Analysis date: Mon Jan 29 09:33:46 2018

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001105262.1NP_001098732.1  granulysin precursor

      See identical proteins and their annotated locations for NP_001098732.1

      Status: PROVISIONAL

      Source sequence(s)
      EF684914
      UniProtKB/TrEMBL
      A6YT17
      Related
      ENSOARP00000002143, ENSOART00000002193
      Conserved Domains (2) summary
      smart00741
      Location:66138
      SapB; Saposin (B) Domains
      pfam05184
      Location:66100
      SapB_1; Saposin-like type B, region 1

    RefSeqs of Annotated Genomes: Ovis aries Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Oar_rambouillet_v1.0 Primary Assembly

    Genomic

    1. NC_040254.1 Reference Oar_rambouillet_v1.0 Primary Assembly

      Range
      61603301..61605778
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027965710.1XP_027821511.1  granulysin isoform X1

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