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    DAG1 dystroglycan 1 [ Gallus gallus (chicken) ]

    Gene ID: 100049058, updated on 14-Feb-2019

    Summary

    Symbol
    DAG1provided by CGNC
    Full Name
    dystroglycan 1provided by CGNC
    Primary source
    CGNC:59244
    See related
    Ensembl:ENSGALG00000037784
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs

    Genomic context

    See DAG1 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    104 current GRCg6a (GCF_000002315.5) 12 NC_006099.5 (2863142..2901306, complement)
    103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 12 NC_006099.4 (2418788..2429944, complement)
    102 previous assembly Gallus_gallus-4.0 (GCF_000002315.3) 12 NC_006099.3 (2441415..2452569, complement)

    Chromosome 12 - NC_006099.5Genomic Context describing neighboring genes Neighboring gene aminomethyltransferase Neighboring gene nicolin 1 Neighboring gene macrophage stimulating 1 (hepatocyte growth factor-like) Neighboring gene acylamino-acid-releasing enzyme-like

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    • ECM-receptor interaction, organism-specific biosystem (from KEGG)
      ECM-receptor interaction, organism-specific biosystemThe extracellular matrix (ECM) consists of a complex mixture of structural and functional macromolecules and serves an important role in tissue and organ morphogenesis and in the maintenance of cell ...
    • ECM-receptor interaction, conserved biosystem (from KEGG)
      ECM-receptor interaction, conserved biosystemThe extracellular matrix (ECM) consists of a complex mixture of structural and functional macromolecules and serves an important role in tissue and organ morphogenesis and in the maintenance of cell ...

    General gene information

    Homology

    General protein information

    Preferred Names
    dystroglycan
    Names
    dystroglycan 1 (dystrophin-associated glycoprotein 1)

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001097540.1NP_001091009.1  dystroglycan precursor

      See identical proteins and their annotated locations for NP_001091009.1

      Status: PROVISIONAL

      Source sequence(s)
      AM690436
      UniProtKB/TrEMBL
      A4VAR9
      Conserved Domains (3) summary
      cd11303
      Location:61162
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      cd11305
      Location:180303
      alpha_DG_C; C-terminal domain of alpha dystroglycan
      pfam05454
      Location:607896
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCg6a Primary Assembly

    Genomic

    1. NC_006099.5 Reference GRCg6a Primary Assembly

      Range
      2863142..2901306 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025154391.1XP_025010159.1  dystroglycan isoform X1

      Related
      ENSGALP00000051570.1, ENSGALT00000065253.2
      Conserved Domains (4) summary
      cd11303
      Location:61162
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      cd11305
      Location:180303
      alpha_DG_C; C-terminal domain of alpha dystroglycan
      pfam05454
      Location:607896
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
      cl26247
      Location:302406
      DNA_pol3_delta2; DNA polymerase III, delta subunit
    2. XM_025154392.1XP_025010160.1  dystroglycan isoform X1

      Conserved Domains (4) summary
      cd11303
      Location:61162
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      cd11305
      Location:180303
      alpha_DG_C; C-terminal domain of alpha dystroglycan
      pfam05454
      Location:607896
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
      cl26247
      Location:302406
      DNA_pol3_delta2; DNA polymerase III, delta subunit
    3. XM_025154393.1XP_025010161.1  dystroglycan isoform X1

      Conserved Domains (4) summary
      cd11303
      Location:61162
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      cd11305
      Location:180303
      alpha_DG_C; C-terminal domain of alpha dystroglycan
      pfam05454
      Location:607896
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
      cl26247
      Location:302406
      DNA_pol3_delta2; DNA polymerase III, delta subunit
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