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    nrip1 nuclear receptor interacting protein 1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100037834, updated on 20-Jun-2018

    Summary

    Symbol
    nrip1provided by Xenbase
    Full Name
    nuclear receptor interacting protein 1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-968871
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs

    Genomic context

    See nrip1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (22599502..22654007, complement)
    102 previous assembly Xtropicalis_v7 (GCF_000004195.2) Unplaced Scaffold NW_004668233.1 (116871657..116927152, complement)

    Chromosome 2 - NC_030678.1Genomic Context describing neighboring genes Neighboring gene heat shock protein family A (Hsp70) member 13 Neighboring gene SAM domain, SH3 domain and nuclear localization signals 1 Neighboring gene uncharacterized LOC108645755 Neighboring gene RNA-directed DNA polymerase homolog Neighboring gene ubiquitin specific peptidase 25

    Genomic regions, transcripts, and products

    General gene information

    Homology

    General protein information

    Preferred Names
    nuclear receptor-interacting protein 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001097283.1NP_001090752.1  nuclear receptor-interacting protein 1

      See identical proteins and their annotated locations for NP_001090752.1

      Status: PROVISIONAL

      Source sequence(s)
      BC131832
      UniProtKB/TrEMBL
      A2RRS6
      Conserved Domains (4) summary
      pfam15687
      Location:27326
      NRIP1_repr_1; Nuclear receptor-interacting protein 1 repression 1
      pfam15688
      Location:407734
      NRIP1_repr_2; Nuclear receptor-interacting protein 1 repression 2
      pfam15689
      Location:750827
      NRIP1_repr_3; Nuclear receptor-interacting protein 1 repression 3
      pfam15690
      Location:8361138
      NRIP1_repr_4; Nuclear receptor-interacting protein 1 repression 4

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_tropicalis_v9.1 Primary Assembly

    Genomic

    1. NC_030678.1 Reference Xenopus_tropicalis_v9.1 Primary Assembly

      Range
      22599502..22654007 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012956228.2XP_012811682.1  nuclear receptor-interacting protein 1 isoform X1

      See identical proteins and their annotated locations for XP_012811682.1

      UniProtKB/TrEMBL
      A2RRS6
      Conserved Domains (4) summary
      pfam15687
      Location:27326
      NRIP1_repr_1; Nuclear receptor-interacting protein 1 repression 1
      pfam15688
      Location:407734
      NRIP1_repr_2; Nuclear receptor-interacting protein 1 repression 2
      pfam15689
      Location:750827
      NRIP1_repr_3; Nuclear receptor-interacting protein 1 repression 3
      pfam15690
      Location:8361138
      NRIP1_repr_4; Nuclear receptor-interacting protein 1 repression 4
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