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    bdh1 3-hydroxybutyrate dehydrogenase, type 1 [ Danio rerio (zebrafish) ]

    Gene ID: 100037356, updated on 14-Feb-2019

    Summary

    Official Symbol
    bdh1provided by ZNC
    Official Full Name
    3-hydroxybutyrate dehydrogenase, type 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-070410-130
    See related
    Ensembl:ENSDARG00000059388
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    zgc:163053

    Genomic context

    See bdh1 in Genome Data Viewer
    Location:
    chromosome: 24
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 24 NC_007135.7 (3328354..3336394)
    105 previous assembly GRCz10 (GCF_000002035.5) 24 NC_007135.6 (3296567..3304607)
    103 previous assembly Zv9 (GCF_000002035.4) 24 NC_007135.5 (3406074..3414114)

    Chromosome 24 - NC_007135.7Genomic Context describing neighboring genes Neighboring gene succinyl-CoA:glutarate-CoA transferase Neighboring gene inhibin subunit beta Aa Neighboring gene glycogenin 1b Neighboring gene NCK adaptor protein 1b Neighboring gene solute carrier family 35 member G2b

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    D-beta-hydroxybutyrate dehydrogenase, mitochondrial
    NP_001082978.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001089509.1NP_001082978.1  D-beta-hydroxybutyrate dehydrogenase, mitochondrial

      See identical proteins and their annotated locations for NP_001082978.1

      Status: PROVISIONAL

      Source sequence(s)
      BC134208
      UniProtKB/TrEMBL
      A3KP84
      Related
      ENSDARP00000119870.1, ENSDART00000147468.2
      Conserved Domains (2) summary
      cd09805
      Location:75358
      type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs
      pfam00106
      Location:75265
      adh_short; short chain dehydrogenase

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007135.7 Reference GRCz11 Primary Assembly

      Range
      3328354..3336394
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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