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    cldn15lb claudin 15-like b [ Danio rerio (zebrafish) ]

    Gene ID: 436719, updated on 22-Aug-2016
    Official Symbol
    cldn15lbprovided by ZNC
    Official Full Name
    claudin 15-like bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040718-145
    See related
    Ensembl:ENSDARG00000100844
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    cldn10l1b; zgc:92349
    Location:
    chromosome: 15
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    105 current GRCz10 (GCF_000002035.5) 15 NC_007126.6 (45547313..45574727)
    103 previous assembly Zv9 (GCF_000002035.4) 15 NC_007126.5 (44766160..44792877)

    Chromosome 15 - NC_007126.6Genomic Context describing neighboring genes Neighboring gene protein MB21D2 Neighboring gene presenilin associated rhomboid like Neighboring gene ATG16 autophagy related 16-like 1 (S. cerevisiae) Neighboring gene S-antigen; retina and pineal gland (arrestin) b

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    • Cell adhesion molecules (CAMs), organism-specific biosystem (from KEGG)
      Cell adhesion molecules (CAMs), organism-specific biosystemCell adhesion molecules are (glyco)proteins expressed on the cell surface and play a critical role in a wide array of biologic processes that include hemostasis, the immune response, inflammation, em...
    • Cell adhesion molecules (CAMs), conserved biosystem (from KEGG)
      Cell adhesion molecules (CAMs), conserved biosystemCell adhesion molecules are (glyco)proteins expressed on the cell surface and play a critical role in a wide array of biologic processes that include hemostasis, the immune response, inflammation, em...
    • Tight junction, organism-specific biosystem (from KEGG)
      Tight junction, organism-specific biosystemEpithelial tight junctions (TJs) are composed of at least three types of transmembrane protein -occludin, claudin and junctional adhesion molecules (JAMs)- and a cytoplasmic 'plaque' consisting of ma...
    • Tight junction, conserved biosystem (from KEGG)
      Tight junction, conserved biosystemEpithelial tight junctions (TJs) are composed of at least three types of transmembrane protein -occludin, claudin and junctional adhesion molecules (JAMs)- and a cytoplasmic 'plaque' consisting of ma...

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    structural molecule activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    intrahepatic bile duct development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    bicellular tight junction IDA
    Inferred from Direct Assay
    more info
    PubMed 
    bicellular tight junction IEA
    Inferred from Electronic Annotation
    more info
     
    cell junction IEA
    Inferred from Electronic Annotation
    more info
     
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    claudin 15-like b
    Names
    claudin 10-like 1b

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001002446.2NP_001002446.2  claudin 15-like b precursor

      Status: VALIDATED

      Source sequence(s)
      EH487007, EH497153
      UniProtKB/TrEMBL
      A0A0R4ID02
      Related
      ENSDARP00000131216, ENSDART00000157501
      Conserved Domains (1) summary
      cl21598
      Location:4177
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz10 Primary Assembly

    Genomic

    1. NC_007126.6 Reference GRCz10 Primary Assembly

      Range
      45547313..45574727
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017359230.1XP_017214719.1  

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