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    Tnfrsf17 tumor necrosis factor receptor superfamily, member 17 [ Mus musculus (house mouse) ]

    Gene ID: 21935, updated on 25-May-2017
    Official Symbol
    Tnfrsf17provided by MGI
    Official Full Name
    tumor necrosis factor receptor superfamily, member 17provided by MGI
    Primary source
    MGI:MGI:1343050
    See related
    Ensembl:ENSMUSG00000022496 Vega:OTTMUSG00000027428
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    BCM; BCMA; Tnfrsf13; Tnfrsf13a
    Orthologs
    Location:
    16; 16 A1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 16 NC_000082.6 (11313174..11320074)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 16 NC_000082.5 (11313902..11320161)

    Chromosome 16 - NC_000082.6Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 2610020C07 gene Neighboring gene G1 to S phase transition 1 Neighboring gene microRNA 1945 Neighboring gene sorting nexin 29 Neighboring gene DEAH (Asp-Glu-Ala-His) box polypeptide 15 pseudogene Neighboring gene tyrosine-protein kinase SgK223 pseudogene

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    adaptive immune response IEA
    Inferred from Electronic Annotation
    more info
     
    immune system process IEA
    Inferred from Electronic Annotation
    more info
     
    lymphocyte homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    tumor necrosis factor receptor superfamily member 17
    Names
    B-cell maturation protein

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_011608.1NP_035738.1  tumor necrosis factor receptor superfamily member 17

      See identical proteins and their annotated locations for NP_035738.1

      Status: PROVISIONAL

      Source sequence(s)
      AF061505
      Consensus CDS
      CCDS27962.1
      UniProtKB/Swiss-Prot
      O88472
      Related
      ENSMUSP00000023140.5, OTTMUSP00000034215, ENSMUST00000023140.5, OTTMUST00000067870
      Conserved Domains (1) summary
      cd13414
      Location:1165
      TNFRSF17; Tumor necrosis factor receptor superfamily member 17 (TNFRSF17), also known as B cell maturation antigen (BCMA), as well as TNFRSF13A

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000082.6 Reference GRCm38.p4 C57BL/6J

      Range
      11313174..11320074
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006521990.2XP_006522053.1  tumor necrosis factor receptor superfamily member 17 isoform X2

      Conserved Domains (2) summary
      cd00185
      Location:2172
      TNFRSF; CRD2 [structural motif]
      cl22855
      Location:1112
      TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)
    2. XM_006521989.3XP_006522052.1  tumor necrosis factor receptor superfamily member 17 isoform X1

      Conserved Domains (1) summary
      cd13414
      Location:1161
      TNFRSF17; Tumor necrosis factor receptor superfamily member 17 (TNFRSF17), also known as B cell maturation antigen (BCMA), as well as TNFRSF13A
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