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    aff-1 Cell fusion protein aff-1 [ Caenorhabditis elegans ]

    Gene ID: 174123, updated on 27-Mar-2017
    Gene symbol
    aff-1
    Gene description
    Cell fusion protein aff-1
    Primary source
    WormBase:WBGene00016625
    Locus tag
    CELE_C44B7.3
    Gene type
    protein coding
    RNA name
    Cell fusion protein aff-1
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    See aff-1 in Map Viewer
    Location:
    chromosome: II
    Exon count:
    12
    Sequence:
    Chromosome: II; NC_003280.10 (6860789..6863752, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene ncRNA Neighboring gene tRNA Neighboring gene DNaJ domain (prokaryotic heat shock protein) Neighboring gene ncRNA Neighboring gene ncRNA

    Markers

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
     
    multicellular organism development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    oviposition IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    plasma membrane fusion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    receptor-mediated endocytosis IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    regulation of oviposition IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    syncytium formation by plasma membrane fusion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    apical plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    cell-cell contact zone IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    extracellular region IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    intracellular organelle IDA
    Inferred from Direct Assay
    more info
    PubMed 
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    Names
    Cell fusion protein aff-1
    NP_495402.3
    • Confirmed by transcript evidence

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      6860789..6863752 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_063001.5NP_495402.3  Cell fusion protein aff-1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_495402.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      G5EGL9
      Conserved Domains (1) summary
      pfam14884
      Location:32565
      EFF-AFF; Type I membrane glycoproteins cell-cell fusogen
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