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    ctf18 RFC-like complex subunit Ctf18 [ Schizosaccharomyces pombe 972h- ]

    Gene ID: 2541270, updated on 6-Aug-2017
    Gene symbol
    ctf18
    Gene description
    RFC-like complex subunit Ctf18
    Primary source
    PomBase:SPBC902.02c
    Locus tag
    SPBC902.02c
    Gene type
    protein coding
    RNA name
    RFC-like complex subunit Ctf18
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe 972h- (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    chl12
    See ctf18 in Map Viewer
    Location:
    chromosome: II
    Exon count:
    3
    Sequence:
    Chromosome: II; NC_003423.3 (483878..486999, complement)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene replication licensing factor Cdt1 Neighboring gene U3 snoRNP protein Utp15 (predicted) Neighboring gene gamma tubulin complex Spc98/GCP3 subunit Alp6 Neighboring gene miscRNA Neighboring gene sporulation-specific protein

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Products Interactant Other Gene Complex Source Pubs Description

    Homology

    3'UTR

    • Loc: c483948-483878

    5'UTR

    • Loc: c486999-486961

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    contributes_to DNA clamp loader activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    DNA-dependent DNA replication maintenance of fidelity IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    DNA-dependent DNA replication maintenance of fidelity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    Ctf18 RFC-like complex IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nuclear chromatin IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nuclear replication fork IC
    Inferred by Curator
    more info
    PubMed 
    nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      483878..486999 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001021106.2NP_595200.1  RFC-like complex subunit Ctf18 [Schizosaccharomyces pombe 972h-]

      See identical proteins and their annotated locations for NP_595200.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9USQ1
      Conserved Domains (3) summary
      cd00009
      Location:412553
      AAA; The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, ...
      smart00382
      Location:416554
      AAA; ATPases associated with a variety of cellular activities
      COG0470
      Location:482647
      HolB; DNA polymerase III, delta prime subunit [Replication, recombination and repair]
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