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    Hbb-bh1 hemoglobin Z, beta-like embryonic chain [ Mus musculus (house mouse) ]

    Gene ID: 15132, updated on 27-Jan-2018
    Official Symbol
    Hbb-bh1provided by MGI
    Official Full Name
    hemoglobin Z, beta-like embryonic chainprovided by MGI
    Primary source
    MGI:MGI:96024
    See related
    Ensembl:ENSMUSG00000052217 Vega:OTTMUSG00000019079
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    betaH1
    Expression
    Biased expression in placenta adult (RPKM 1662.1), CNS E11.5 (RPKM 649.0) and 1 other tissue See more
    Location:
    7 E3; 7 54.85 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 7 NC_000073.6 (103841638..103843162, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (110990152..110991676, complement)

    Chromosome 7 - NC_000073.6Genomic Context describing neighboring genes Neighboring gene hemoglobin beta, pseudogene bh3 Neighboring gene hemoglobin beta, bh2 Neighboring gene hemoglobin Y, beta-like embryonic chain Neighboring gene olfactory receptor 66

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    heme binding ISO
    Inferred from Sequence Orthology
    more info
     
    hemoglobin alpha binding ISO
    Inferred from Sequence Orthology
    more info
     
    iron ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    oxygen binding IEA
    Inferred from Electronic Annotation
    more info
     
    oxygen carrier activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    negative regulation of transcription by RNA polymerase II IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    oxygen transport IEA
    Inferred from Electronic Annotation
    more info
     
    protein heterooligomerization ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    hemoglobin complex ISO
    Inferred from Sequence Orthology
    more info
     
    Preferred Names
    hemoglobin subunit beta-H1
    Names
    beta Hl globin
    beta-H1-globin
    hemoglobin beta-H1 chain
    minor beta-globin
    protein Z

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_008219.3NP_032245.1  hemoglobin subunit beta-H1

      See identical proteins and their annotated locations for NP_032245.1

      Status: PROVISIONAL

      Source sequence(s)
      AK012684
      Consensus CDS
      CCDS21592.1
      UniProtKB/Swiss-Prot
      P04444
      UniProtKB/TrEMBL
      Q5EBL1
      Related
      ENSMUSP00000064865.4, OTTMUSP00000020569, ENSMUST00000063957.5, OTTMUST00000045698
      Conserved Domains (1) summary
      cd08925
      Location:7146
      Hb-beta_like; Hemoglobin beta, gamma, delta, epsilon, and related Hb subunits

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000073.6 Reference GRCm38.p4 C57BL/6J

      Range
      103841638..103843162 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCm38.p4 BALB/c

    Genomic

    1. NT_095534.1 Reference GRCm38.p4 BALB/c

      Range
      21053..22580
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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