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    Thrsp thyroid hormone responsive [ Mus musculus (house mouse) ]

    Gene ID: 21835, updated on 27-Jan-2018
    Official Symbol
    Thrspprovided by MGI
    Official Full Name
    thyroid hormone responsiveprovided by MGI
    Primary source
    MGI:MGI:109126
    See related
    Ensembl:ENSMUSG00000035686 Vega:OTTMUSG00000026137
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    S14; SPOT14
    Expression
    Biased expression in subcutaneous fat pad adult (RPKM 923.9), mammary gland adult (RPKM 720.3) and 6 other tissues See more
    Orthologs
    Location:
    7; 7 E1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 7 NC_000073.6 (97412933..97417550, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (104561467..104566020, complement)

    Chromosome 7 - NC_000073.6Genomic Context describing neighboring genes Neighboring gene asparagine-linked glycosylation 8 (alpha-1,3-glucosyltransferase) Neighboring gene NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2 Neighboring gene predicted gene, 32945 Neighboring gene potassium channel tetramerisation domain containing 14

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    identical protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    protein homodimerization activity IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    regulation of lipid biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    regulation of lipid biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    regulation of transcription, DNA-templated IEA
    Inferred from Electronic Annotation
    more info
     
    regulation of triglyceride biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    transcription, DNA-templated IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    thyroid hormone-inducible hepatic protein
    Names
    spot 14 protein
    thyroid hormone responsive SPOT14 homolog

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_009381.3NP_033407.1  thyroid hormone-inducible hepatic protein

      See identical proteins and their annotated locations for NP_033407.1

      Status: VALIDATED

      Source sequence(s)
      AC172193, AI117155, AK077300, BY238050
      Consensus CDS
      CCDS21458.1
      UniProtKB/Swiss-Prot
      Q62264
      UniProtKB/TrEMBL
      Q543J4, Q8BPB6
      Related
      ENSMUSP00000042988.7, OTTMUSP00000032084, ENSMUST00000043077.7, OTTMUST00000064553
      Conserved Domains (1) summary
      pfam07084
      Location:2147
      Spot_14; Thyroid hormone-inducible hepatic protein Spot 14

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000073.6 Reference GRCm38.p4 C57BL/6J

      Range
      97412933..97417550 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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