Format

Send to:

Choose Destination

Links from PubMed

    • Showing Current items.

    SUS1 Sus1p [ Saccharomyces cerevisiae S288c ]

    Gene ID: 1466445, updated on 9-Apr-2017
    Gene symbol
    SUS1
    Gene description
    Sus1p
    Primary source
    SGD:S000028510
    Locus tag
    YBR111W-A
    Gene type
    protein coding
    RNA name
    Sus1p
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288c (strain: S288c)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    See SUS1 in Map Viewer
    Location:
    chromosome: II
    Exon count:
    3
    Sequence:
    Chromosome: II; NC_001134.8 (462139..462579)

    Chromosome II - NC_001134.8Genomic Context describing neighboring genes Neighboring gene chitobiosyldiphosphodolichol beta-1,4 mannosyltransferase Neighboring gene ADP-ribose diphosphatase Neighboring gene transcription regulator CYC8 Neighboring gene DNA repair protein RAD16

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Products Interactant Other Gene Complex Source Pubs Description

    Gene Ontology Provided by GO

    Function Evidence Code Pubs
    chromatin binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enzyme activator activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    transcription coactivator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    transcription coactivator activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    covalent chromatin modification IEA
    Inferred from Electronic Annotation
    more info
     
    histone H3-K4 methylation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    histone H3-K79 methylation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    histone deubiquitination IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    mRNA export from nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    mRNA transport IEA
    Inferred from Electronic Annotation
    more info
     
    nuclear retention of pre-mRNA at the site of transcription IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    poly(A)+ mRNA export from nucleus IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    positive regulation of catalytic activity IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of transcription from RNA polymerase II promoter IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    positive regulation of transcription from RNA polymerase II promoter IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    positive regulation of transcription, DNA-templated IEA
    Inferred from Electronic Annotation
    more info
     
    posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    regulation of protein localization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    regulation of transcription, DNA-templated IEA
    Inferred from Electronic Annotation
    more info
     
    transcription elongation from RNA polymerase II promoter IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    transcription, DNA-templated IEA
    Inferred from Electronic Annotation
    more info
     
    transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    DUBm complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    P-body IEA
    Inferred from Electronic Annotation
    more info
     
    SAGA complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    SAGA complex IEA
    Inferred from Electronic Annotation
    more info
     
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    colocalizes_with nuclear pore IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nuclear pore IEA
    Inferred from Electronic Annotation
    more info
     
    nucleoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    transcription export complex 2 IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Names
    Sus1p
    NP_878049.2
    • Component of both the SAGA histone acetylase and TREX-2 complexes; interacts with RNA polymerase II; involved in mRNA export coupled transcription activation and elongation; involved in post-transcriptional tethering of active genes to the nuclear periphery and to non-nascent mRNP

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001134.8 Reference assembly

      Range
      462139..462579
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001184520.1NP_878049.2  TPA: Sus1p [Saccharomyces cerevisiae S288c]

      See identical proteins and their annotated locations for NP_878049.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q6WNK7
      Conserved Domains (1) summary
      pfam10163
      Location:1089
      EnY2; Transcription factor e(y)2
    Support Center