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    Larp6 La ribonucleoprotein domain family, member 6 [ Mus musculus (house mouse) ]

    Gene ID: 67557, updated on 22-Apr-2017
    Official Symbol
    Larp6provided by MGI
    Official Full Name
    La ribonucleoprotein domain family, member 6provided by MGI
    Primary source
    MGI:MGI:1914807
    See related
    Ensembl:ENSMUSG00000034839 Vega:OTTMUSG00000027546
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Achn; AI552438; 5430431G03Rik
    Orthologs
    Location:
    9; 9 B
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 9 NC_000075.6 (60713121..60738801)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (60560928..60586608)

    Chromosome 9 - NC_000075.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 33406 Neighboring gene annexin A7 pseudogene Neighboring gene leucine rich repeat containing 49 Neighboring gene RIKEN cDNA 1700036A12 gene Neighboring gene uveal autoantigen with coiled-coil domains and ankyrin repeats Neighboring gene predicted gene, 33643

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Markers

    Homology

    Clone Names

    • MGC115805

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    RNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    RNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    regulation of translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    intracellular ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
     
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    la-related protein 6
    Names
    acheron

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026235.4NP_080511.2  la-related protein 6

      See identical proteins and their annotated locations for NP_080511.2

      Status: PROVISIONAL

      Source sequence(s)
      AC127370
      Consensus CDS
      CCDS23258.1
      UniProtKB/Swiss-Prot
      Q8BN59
      Related
      ENSMUSP00000040309.5, OTTMUSP00000034427, ENSMUST00000038407.5, OTTMUST00000068212
      Conserved Domains (3) summary
      cd08033
      Location:93169
      LARP_6; La RNA-binding domain of La-related protein 6
      cd12289
      Location:184292
      RRM_LARP6; RNA recognition motif in La-related protein 6 (LARP6) and similar proteins
      pfam12901
      Location:468482
      SUZ-C; SUZ-C motif

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000075.6 Reference GRCm38.p4 C57BL/6J

      Range
      60713121..60738801
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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