Format

Send to:

Choose Destination

Links from PubMed

    • Showing Current items.

    SPPA signal peptide peptidase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843737, updated on 27-Mar-2017
    Gene symbol
    SPPA
    Gene description
    signal peptide peptidase
    Primary source
    Araport:AT1G73990
    Locus tag
    AT1G73990
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F2P9.14; F2P9_14; signal peptide peptidase; SPPA1
    Summary
    Encodes a putative protease SppA (SppA).
    See SPPA in Map Viewer
    Location:
    chromosome: 1
    Exon count:
    13
    Sequence:
    Chromosome: 1; NC_003070.9 (27824355..27829039)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene CLAVATA3/ESR-RELATED 13 Neighboring gene obscurin-like protein Neighboring gene Phosphoribulokinase / Uridine kinase family Neighboring gene strictosidine synthase 3 Neighboring gene Calcium-dependent phosphotriesterase superfamily protein

    NM_001334622.1
    NM_106058.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    serine-type endopeptidase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    proteolysis IDA
    Inferred from Direct Assay
    more info
    PubMed 
    response to light intensity IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    signal peptide processing IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    chloroplast IDA
    Inferred from Direct Assay
    more info
    PubMed 
    chloroplast envelope IDA
    Inferred from Direct Assay
    more info
    PubMed 
    chloroplast stroma IEA
    Inferred from Electronic Annotation
    more info
     
    chloroplast thylakoid IDA
    Inferred from Direct Assay
    more info
    PubMed 
    chloroplast thylakoid membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    plasma membrane ISM
    Inferred from Sequence Model
    more info
     
    Names
    signal peptide peptidase
    NP_565077.2
    • signal peptide peptidase (SPPA); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, response to light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S49, protease IV (InterPro:IPR004634), Peptidase S49 (InterPro:IPR002142), Peptidase S49, SppA (InterPro:IPR004635); Has 9340 Blast hits to 7649 proteins in 1706 species: Archae - 204; Bacteria - 6183; Metazoa - 9; Fungi - 4; Plants - 52; Viruses - 43; Other Eukaryotes - 2845 (source: NCBI BLink).

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      27824355..27829039
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106058.3NP_565077.2  signal peptide peptidase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565077.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C9C0
      UniProtKB/TrEMBL
      A0A178WBG0
      Conserved Domains (3) summary
      cd07018
      Location:128341
      S49_SppA_67K_type; Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad
      cd07023
      Location:375590
      S49_Sppa_N_C; Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad
      TIGR00705
      Location:122639
      SppA_67K; signal peptide peptidase SppA, 67K type
    2. NM_001334622.1NP_001322608.1  signal peptide peptidase [Arabidopsis thaliana]

      Status: REVIEWED

    Support Center