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    opa odd paired [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40605, updated on 9-Jul-2017
    Official Symbol
    opaprovided by FlyBase
    Official Full Name
    odd pairedprovided by FlyBase
    Primary source
    FLYBASE:FBgn0003002
    Locus tag
    Dmel_CG1133
    Gene type
    protein coding
    RNA name
    odd paired
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster (old-lineage: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG1133; Dmel\CG1133; Opa
    Location:
    82D8-82E1; 3-48 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.13 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (4852813..4869979)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (678535..695701)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene CG14658 gene product from transcript CG14658-RA Neighboring gene CG14659 gene product from transcript CG14659-RA Neighboring gene labial associated factor Neighboring gene ncRNA

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Products Interactant Other Gene Complex Source Pubs Description
    Preferred Names
    CG1133 gene product from transcript CG1133-RA
    Names
    CG1133-PA
    GLI-Kr zinc finger pair-rule protein
    Odd-paired
    odd paired
    opa-PA

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      4852813..4869979
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079504.4NP_524228.2  odd paired [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524228.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P39768
      Related
      FBpp0078477, FBtr0078836
      Conserved Domains (2) summary
      sd00017
      Location:265285
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:307334
      zf-H2C2_2; Zinc-finger double domain
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