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    RTN1 Rtn1p [ Saccharomyces cerevisiae S288c ]

    Gene ID: 851819, updated on 9-Apr-2017
    Gene symbol
    RTN1
    Gene description
    Rtn1p
    Primary source
    SGD:S000002641
    Locus tag
    YDR233C
    Gene type
    protein coding
    RNA name
    Rtn1p
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288c (strain: S288c)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    See RTN1 in Map Viewer
    Location:
    chromosome: IV
    Exon count:
    1
    Sequence:
    Chromosome: IV; NC_001136.10 (929470..930357, complement)

    Chromosome IV - NC_001136.10Genomic Context describing neighboring genes Neighboring gene Cox20p Neighboring gene 5-aminolevulinate synthase Neighboring gene homoaconitate hydratase LYS4 Neighboring gene mRNA splicing protein PRP42

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Products Interactant Other Gene Complex Source Pubs Description

    Homology

    Gene Ontology Provided by GO

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    ER-dependent peroxisome organization IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    endoplasmic reticulum inheritance IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    endoplasmic reticulum organization IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    endoplasmic reticulum tubular network maintenance IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    endoplasmic reticulum tubular network organization IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    endoplasmic reticulum tubular network organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    endoplasmic reticulum tubular network organization IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    nuclear pore complex assembly IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    response to endoplasmic reticulum stress IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cell periphery IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cortical endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    PubMed 
    endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    PubMed 
    endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
     
    endoplasmic reticulum tubular network IDA
    Inferred from Direct Assay
    more info
    PubMed 
    integral component of endoplasmic reticulum membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    mitochondrion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Names
    Rtn1p
    NP_010519.3
    • Reticulon protein; involved in nuclear pore assembly and maintenance of tubular ER morphology; promotes membrane curvature; regulates the ER asymmetry-induced inheritance block during ER stress; role in ER-derived peroxisomal biogenesis; increases tubular ER when overexpressed; mutants have reduced phosphatidylserine transfer between the ER and mitochondria; interacts with exocyst subunit Sec6p, Yip3p, and Sbh1p; member of the RTNLA subfamily

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001136.10 Reference assembly

      Range
      929470..930357 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001180541.3NP_010519.3  TPA: Rtn1p [Saccharomyces cerevisiae S288c]

      See identical proteins and their annotated locations for NP_010519.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q04947
      Conserved Domains (1) summary
      pfam02453
      Location:21178
      Reticulon; Reticulon
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