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    RABGEF1 RAB guanine nucleotide exchange factor 1 [ Bos taurus (cattle) ]

    Gene ID: 282335, updated on 8-May-2017
    Gene symbol
    RABGEF1
    Gene description
    RAB guanine nucleotide exchange factor 1
    See related
    BGD:BT26180; Ensembl:ENSBTAG00000003842
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    RABEX5
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    Location:
    chromosome: 25
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    105 current Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 25 AC_000182.1 (28509106..28532974)

    Chromosome 25 - AC_000182.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S6 pseudogene Neighboring gene potassium channel tetramerization domain containing 7 Neighboring gene uncharacterized LOC104975883 Neighboring gene transmembrane protein 248 Neighboring gene uncharacterized LOC101904536

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Products Interactant Other Gene Complex Source Pubs Description

    Homology

    Clone Names

    • MGC128930

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    endocytosis IEA
    Inferred from Electronic Annotation
    more info
     
    protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    early endosome IEA
    Inferred from Electronic Annotation
    more info
     
    recycling endosome IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    rab5 GDP/GTP exchange factor
    Names
    RAB guanine nucleotide exchange factor (GEF) 1
    Rab5 guanine nucleotide exchange factor Rabex-5
    rabex-5

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_174591.1NP_777016.1  rab5 GDP/GTP exchange factor

      See identical proteins and their annotated locations for NP_777016.1

      Status: PROVISIONAL

      Source sequence(s)
      AJ001119
      UniProtKB/Swiss-Prot
      O18973
      Related
      ENSBTAP00000005011.5, ENSBTAT00000005011.5
      Conserved Domains (2) summary
      pfam01754
      Location:1740
      zf-A20; A20-like zinc finger
      pfam02204
      Location:271371
      VPS9; Vacuolar sorting protein 9 (VPS9) domain

    RefSeqs of Annotated Genomes: Bos taurus Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Bos_taurus_UMD_3.1.1 Primary Assembly

    Genomic

    1. AC_000182.1 Reference Bos_taurus_UMD_3.1.1 Primary Assembly

      Range
      28509106..28532974
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Btau_5.0.1

    Genomic

    1. NC_007326.6 Alternate Btau_5.0.1

      Range
      28653090..28676958
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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