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    SKI8 SKI complex subunit WD repeat protein SKI8 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 852659, updated on 5-Nov-2017
    Gene symbol
    SKI8
    Gene description
    SKI complex subunit WD repeat protein SKI8
    Primary source
    SGD:S000003181
    Locus tag
    YGL213C
    Gene type
    protein coding
    RNA name
    SKI complex subunit WD repeat protein SKI8
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288c)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Also known as
    REC103
    Location:
    chromosome: VII
    Exon count:
    1
    Sequence:
    Chromosome: VII; NC_001139.9 (90054..91247, complement)

    Chromosome VII - NC_001139.9Genomic Context describing neighboring genes Neighboring gene tubulin-dependent ATPase KIP3 Neighboring gene Clg1p Neighboring gene Vam7p Neighboring gene Ncs6p

    • RNA degradation, organism-specific biosystem (from KEGG)
      RNA degradation, organism-specific biosystemThe correct processing, quality control and turnover of cellular RNA molecules are critical to many aspects in the expression of genetic information. In eukaryotes, two major pathways of mRNA decay e...
    • RNA degradation, conserved biosystem (from KEGG)
      RNA degradation, conserved biosystemThe correct processing, quality control and turnover of cellular RNA molecules are critical to many aspects in the expression of genetic information. In eukaryotes, two major pathways of mRNA decay e...
    • Ski complex, organism-specific biosystem (from KEGG)
      Ski complex, organism-specific biosystemStructural complex; Genetic information processing; RNA processing
    • Ski complex, conserved biosystem (from KEGG)
      Ski complex, conserved biosystemStructural complex; Genetic information processing; RNA processing
    Products Interactant Other Gene Complex Source Pubs Description

    Homology

    Gene Ontology Provided by GO

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    Ski complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Ski complex IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    chromosome IEA
    Inferred from Electronic Annotation
    more info
     
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    nuclear chromosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    Names
    SKI complex subunit WD repeat protein SKI8
    NP_011302.1
    • Ski complex component and WD-repeat protein; mediates 3'-5' RNA degradation by the cytoplasmic exosome; also required for meiotic double-strand break recombination; null mutants have superkiller phenotype

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001139.9 Reference assembly

      Range
      90054..91247 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001181078.1NP_011302.1  TPA: SKI complex subunit WD repeat protein SKI8 [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_011302.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q02793
      Conserved Domains (3) summary
      COG2319
      Location:13359
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:1960
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:13351
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
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