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    Pltp phospholipid transfer protein [ Mus musculus (house mouse) ]

    Gene ID: 18830, updated on 19-May-2018
    Official Symbol
    Pltpprovided by MGI
    Official Full Name
    phospholipid transfer proteinprovided by MGI
    Primary source
    MGI:MGI:103151
    See related
    Ensembl:ENSMUSG00000017754 Vega:OTTMUSG00000001168
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Bpife; OD107
    Expression
    Broad expression in lung adult (RPKM 368.4), subcutaneous fat pad adult (RPKM 153.5) and 18 other tissues See more
    Orthologs
    See Pltp in Genome Data Viewer
    Location:
    2 H3; 2 85.27 cM
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 2 NC_000068.7 (164839518..164857708, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (164665018..164683208, complement)

    Chromosome 2 - NC_000068.7Genomic Context describing neighboring genes Neighboring gene spermatogenesis associated 25 Neighboring gene neuralized E3 ubiquitin protein ligase 2 Neighboring gene cathepsin A Neighboring gene RIKEN cDNA 4930445K14 gene Neighboring gene PDX1 C-terminal inhibiting factor 1 Neighboring gene predicted gene, 46775

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    Products Interactant Other Gene Complex Source Pubs Description

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    ceramide binding ISO
    Inferred from Sequence Orthology
    more info
     
    ceramide transporter activity ISO
    Inferred from Sequence Orthology
    more info
     
    diacylglycerol binding ISO
    Inferred from Sequence Orthology
    more info
     
    lipid binding IEA
    Inferred from Electronic Annotation
    more info
     
    lipid transporter activity ISO
    Inferred from Sequence Orthology
    more info
     
    phosphatidic acid binding ISO
    Inferred from Sequence Orthology
    more info
     
    phosphatidic acid transporter activity ISO
    Inferred from Sequence Orthology
    more info
     
    phosphatidylcholine binding ISO
    Inferred from Sequence Orthology
    more info
     
    phosphatidylcholine transporter activity ISO
    Inferred from Sequence Orthology
    more info
     
    phosphatidylethanolamine binding ISO
    Inferred from Sequence Orthology
    more info
     
    phosphatidylethanolamine transporter activity ISO
    Inferred from Sequence Orthology
    more info
     
    phosphatidylglycerol binding ISO
    Inferred from Sequence Orthology
    more info
     
    phospholipid transporter activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    ceramide transport ISO
    Inferred from Sequence Orthology
    more info
     
    flagellated sperm motility IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    high-density lipoprotein particle remodeling ISO
    Inferred from Sequence Orthology
    more info
     
    lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    lipid transport ISO
    Inferred from Sequence Orthology
    more info
     
    phospholipid transport ISO
    Inferred from Sequence Orthology
    more info
     
    positive regulation of cholesterol efflux ISO
    Inferred from Sequence Orthology
    more info
     
    vitamin E biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    extracellular space HDA PubMed 
    high-density lipoprotein particle ISO
    Inferred from Sequence Orthology
    more info
     
    Preferred Names
    phospholipid transfer protein
    Names
    lipid transfer protein II

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_011125.2NP_035255.1  phospholipid transfer protein precursor

      See identical proteins and their annotated locations for NP_035255.1

      Status: VALIDATED

      Source sequence(s)
      AK148330, AK149730, U37226
      Consensus CDS
      CCDS17063.1
      UniProtKB/Swiss-Prot
      P55065
      UniProtKB/TrEMBL
      Q3UE59, Q3UFS5
      Related
      ENSMUSP00000061519.7, OTTMUSP00000001109, ENSMUST00000059954.13, OTTMUST00000002264
      Conserved Domains (2) summary
      smart00328
      Location:25243
      BPI1; BPI/LBP/CETP N-terminal domain
      pfam02886
      Location:228464
      LBP_BPI_CETP_C; LBP / BPI / CETP family, C-terminal domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000068.7 Reference GRCm38.p4 C57BL/6J

      Range
      164839518..164857708 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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