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    Fbl fibrillarin [ Mus musculus (house mouse) ]

    Gene ID: 14113, updated on 22-Apr-2017
    Official Symbol
    Fblprovided by MGI
    Official Full Name
    fibrillarinprovided by MGI
    Primary source
    MGI:MGI:95486
    See related
    Ensembl:ENSMUSG00000046865 Vega:OTTMUSG00000058942
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    FIB; FLRN; RNU3IP1; AL022665
    Orthologs
    Location:
    7; 7 A3
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 7 NC_000073.6 (28169748..28179269)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (28954767..28964288)

    Chromosome 7 - NC_000073.6Genomic Context describing neighboring genes Neighboring gene tectorin alpha pseudogene Neighboring gene RIKEN cDNA 9530053A07 gene Neighboring gene predicted gene, 38976 Neighboring gene uncharacterized LOC105242891 Neighboring gene dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b Neighboring gene ring finger and WD repeat domain 2 pseudogene

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Products Interactant Other Gene Complex Source Pubs Description

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    ATPase binding ISO
    Inferred from Sequence Orthology
    more info
     
    RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    RNA binding ISO
    Inferred from Sequence Orthology
    more info
     
    TFIID-class transcription factor binding ISO
    Inferred from Sequence Orthology
    more info
     
    histone-glutamine methyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    histone-glutamine methyltransferase activity ISO
    Inferred from Sequence Orthology
    more info
     
    methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    rRNA methyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    box C/D snoRNA 3'-end processing IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    histone glutamine methylation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    histone glutamine methylation ISO
    Inferred from Sequence Orthology
    more info
     
    histone methylation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    methylation IEA
    Inferred from Electronic Annotation
    more info
     
    osteoblast differentiation ISO
    Inferred from Sequence Orthology
    more info
     
    rRNA methylation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    rRNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    snoRNA localization ISO
    Inferred from Sequence Orthology
    more info
     
    snoRNA metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    tRNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    Cajal body IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Cajal body ISO
    Inferred from Sequence Orthology
    more info
     
    box C/D snoRNP complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    chromosome ISO
    Inferred from Sequence Orthology
    more info
     
    dense fibrillar component ISO
    Inferred from Sequence Orthology
    more info
     
    extracellular exosome ISO
    Inferred from Sequence Orthology
    more info
     
    fibrillar center ISO
    Inferred from Sequence Orthology
    more info
     
    granular component IDA
    Inferred from Direct Assay
    more info
    PubMed 
    intracellular ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
     
    membrane ISO
    Inferred from Sequence Orthology
    more info
     
    nucleolus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nucleolus ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    nucleolus ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    small-subunit processome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Preferred Names
    rRNA 2'-O-methyltransferase fibrillarin
    Names
    histone-glutamine methyltransferase
    nucleolar protein 1

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_007991.3NP_032017.2  rRNA 2'-O-methyltransferase fibrillarin

      See identical proteins and their annotated locations for NP_032017.2

      Status: VALIDATED

      Source sequence(s)
      AV486126, BU511282
      Consensus CDS
      CCDS21036.1
      UniProtKB/Swiss-Prot
      P35550
      Related
      ENSMUSP00000037613.6, OTTMUSP00000075363, ENSMUST00000042405.7, OTTMUST00000144627
      Conserved Domains (1) summary
      PTZ00146
      Location:88326
      PTZ00146; fibrillarin; Provisional

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000073.6 Reference GRCm38.p4 C57BL/6J

      Range
      28169748..28179269
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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