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    Plac8 placenta-specific 8 [ Mus musculus (house mouse) ]

    Gene ID: 231507, updated on 22-Apr-2017
    Official Symbol
    Plac8provided by MGI
    Official Full Name
    placenta-specific 8provided by MGI
    Primary source
    MGI:MGI:2445289
    See related
    Ensembl:ENSMUSG00000029322 Vega:OTTMUSG00000026150
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    C15; D5Wsu111e
    Orthologs
    Location:
    5 E4; 5 48.49 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 5 NC_000071.6 (100551589..100572251, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (100982752..101001224, complement)

    Chromosome 5 - NC_000071.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 19620 Neighboring gene COP9 signalosome subunit 4 Neighboring gene coenzyme Q2 4-hydroxybenzoate polyprenyltransferase Neighboring gene heparanase

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    chromatin binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    nucleus IC
    Inferred by Curator
    more info
    PubMed 
    Preferred Names
    placenta-specific gene 8 protein
    Names
    onzin

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_139198.2NP_631937.1  placenta-specific gene 8 protein

      See identical proteins and their annotated locations for NP_631937.1

      Status: PROVISIONAL

      Source sequence(s)
      AK007369
      Consensus CDS
      CCDS19464.1
      UniProtKB/Swiss-Prot
      Q9JI48
      Related
      ENSMUSP00000031264.5, OTTMUSP00000032100, ENSMUST00000031264.11, OTTMUST00000064586
      Conserved Domains (1) summary
      TIGR01571
      Location:21105
      A_thal_Cys_rich; uncharacterized Cys-rich domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000071.6 Reference GRCm38.p4 C57BL/6J

      Range
      100551589..100572251 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017320850.1XP_017176339.1  placenta-specific gene 8 protein isoform X1

    2. XM_017320849.1XP_017176338.1  placenta-specific gene 8 protein isoform X1

    3. XM_017320851.1XP_017176340.1  placenta-specific gene 8 protein isoform X2

    4. XM_011249430.1XP_011247732.1  placenta-specific gene 8 protein isoform X3

      See identical proteins and their annotated locations for XP_011247732.1

      UniProtKB/Swiss-Prot
      Q9JI48
      Related
      ENSMUSP00000108531.1, OTTMUSP00000032101, ENSMUST00000112910.1, OTTMUST00000064588
      Conserved Domains (1) summary
      TIGR01571
      Location:21105
      A_thal_Cys_rich; uncharacterized Cys-rich domain
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