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    Tsx testis specific X-linked gene [ Mus musculus (house mouse) ]

    Gene ID: 22127, updated on 25-May-2017
    Official Symbol
    Tsxprovided by MGI
    Official Full Name
    testis specific X-linked geneprovided by MGI
    Primary source
    MGI:MGI:108118
    See related
    Ensembl:ENSMUSG00000031329 Vega:OTTMUSG00000018249
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AV207184
    Location:
    X D; X 46.12 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) X NC_000086.7 (103409101..103424588)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) X NC_000086.6 (100609806..100619922)

    Chromosome X - NC_000086.7Genomic Context describing neighboring genes Neighboring gene predicted gene 9516 Neighboring gene cysteine-rich hydrophobic domain 1 Neighboring gene X (inactive)-specific transcript, opposite strand Neighboring gene inactive X specific transcripts Neighboring gene predicted gene 14861

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    adult behavior IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    fertilization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    male gonad development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Preferred Names
    testis-specific protein TSX
    Names
    testis-specific X-linked protein

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_009440.3NP_033466.1  testis-specific protein TSX

      See identical proteins and their annotated locations for NP_033466.1

      Status: VALIDATED

      Source sequence(s)
      AV265136, BC048493
      Consensus CDS
      CCDS41090.1
      UniProtKB/Swiss-Prot
      P70675
      UniProtKB/TrEMBL
      Q78Z65
      Related
      ENSMUSP00000033691.4, OTTMUSP00000019825, ENSMUST00000033691.4, OTTMUST00000044106

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000086.7 Reference GRCm38.p4 C57BL/6J

      Range
      103409101..103424588
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006527941.2XP_006528004.1  testis-specific protein TSX isoform X1

      See identical proteins and their annotated locations for XP_006528004.1

      UniProtKB/Swiss-Prot
      P70675
      UniProtKB/TrEMBL
      Q78Z65
    2. XM_006527940.3XP_006528003.1  testis-specific protein TSX isoform X1

      See identical proteins and their annotated locations for XP_006528003.1

      UniProtKB/Swiss-Prot
      P70675
      UniProtKB/TrEMBL
      Q78Z65
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