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    LOC100506207 uncharacterized LOC100506207 [ Homo sapiens (human) ]

    Gene ID: 100506207, updated on 8-Apr-2017
    Gene symbol
    LOC100506207
    Gene description
    uncharacterized LOC100506207
    Gene type
    ncRNA
    RNA type
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    See LOC100506207 in Genome Data Viewer Map Viewer
    Location:
    6p24.3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    108 current GRCh38.p7 (GCF_000001405.33) 6 NC_000006.12 (8435623..8785445)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (8435856..8785678)

    Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105374912 Neighboring gene solute carrier family 35 member B3 Neighboring gene hepatocellular carcinoma up-regulated long non-coding RNA Neighboring gene uncharacterized LOC105374913 Neighboring gene uncharacterized LOC105374914

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Jun 15 11:32:44 2016

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Markers

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_038979.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript.
      Source sequence(s)
      AL135912, AL355815, BC040612, CD243731
    2. NR_038980.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) lacks an exon, includes two alternate exons and uses an alternate splice site, compared to variant 1.
      Source sequence(s)
      AI125458, AL355815, BC040612, BX111366, CD243731

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 108 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p7 Primary Assembly

    Genomic

    1. NC_000006.12 Reference GRCh38.p7 Primary Assembly

      Range
      8435623..8785445
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate CHM1_1.1

    Genomic

    1. NC_018917.2 Alternate CHM1_1.1

      Range
      8437986..8788120
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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