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    Supv3l1 suppressor of var1, 3-like 1 (S. cerevisiae) [ Mus musculus (house mouse) ]

    Gene ID: 338359, updated on 12-Mar-2017
    Official Symbol
    Supv3l1provided by MGI
    Official Full Name
    suppressor of var1, 3-like 1 (S. cerevisiae)provided by MGI
    Primary source
    MGI:MGI:2441711
    See related
    Ensembl:ENSMUSG00000020079 Vega:OTTMUSG00000017268
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    6330443E10Rik
    Orthologs
    Location:
    10; 10 B4
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 10 NC_000076.6 (62429329..62451295, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 10 NC_000076.5 (61892126..61912441, complement)

    Chromosome 10 - NC_000076.6Genomic Context describing neighboring genes Neighboring gene hexokinase 1 Neighboring gene predicted gene, 40675 Neighboring gene hexokinase domain containing 1 Neighboring gene predicted gene, 30322 Neighboring gene RIKEN cDNA 4930507D05 gene Neighboring gene VPS26 retromer complex component A Neighboring gene serglycin

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    3'-5' RNA helicase activity ISO
    Inferred from Sequence Orthology
    more info
     
    ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    ATP-dependent RNA helicase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    ATP-dependent RNA helicase activity ISO
    Inferred from Sequence Orthology
    more info
     
    DNA binding ISO
    Inferred from Sequence Orthology
    more info
     
    DNA helicase activity ISO
    Inferred from Sequence Orthology
    more info
     
    RNA binding ISO
    Inferred from Sequence Orthology
    more info
     
    double-stranded RNA binding ISO
    Inferred from Sequence Orthology
    more info
     
    helicase activity IEA
    Inferred from Electronic Annotation
    more info
     
    hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    hydrolase activity, acting on acid anhydrides IEA
    Inferred from Electronic Annotation
    more info
     
    nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein homodimerization activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    DNA duplex unwinding ISO
    Inferred from Sequence Orthology
    more info
     
    DNA recombination ISO
    Inferred from Sequence Orthology
    more info
     
    RNA catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    RNA catabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    chromatin maintenance ISO
    Inferred from Sequence Orthology
    more info
     
    mitochondrial RNA 3'-end processing IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    mitochondrial RNA 3'-end processing ISO
    Inferred from Sequence Orthology
    more info
     
    mitochondrial RNA surveillance ISO
    Inferred from Sequence Orthology
    more info
     
    mitochondrial mRNA catabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    mitochondrial mRNA surveillance ISO
    Inferred from Sequence Orthology
    more info
     
    mitochondrial ncRNA surveillance ISO
    Inferred from Sequence Orthology
    more info
     
    mitochondrion morphogenesis ISO
    Inferred from Sequence Orthology
    more info
     
    negative regulation of apoptotic process ISO
    Inferred from Sequence Orthology
    more info
     
    positive regulation of cell growth ISO
    Inferred from Sequence Orthology
    more info
     
    positive regulation of mitochondrial RNA catabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    mitochondrial degradosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    mitochondrial degradosome ISO
    Inferred from Sequence Orthology
    more info
     
    mitochondrial matrix ISO
    Inferred from Sequence Orthology
    more info
     
    mitochondrial nucleoid ISO
    Inferred from Sequence Orthology
    more info
     
    mitochondrion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    Preferred Names
    ATP-dependent RNA helicase SUPV3L1, mitochondrial
    Names
    SUV3-like protein 1
    suppressor of var1 3-like protein 1
    NP_852088.1

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_181423.2NP_852088.1  ATP-dependent RNA helicase SUPV3L1, mitochondrial precursor

      See identical proteins and their annotated locations for NP_852088.1

      Status: PROVISIONAL

      Source sequence(s)
      BC049796
      Consensus CDS
      CCDS35920.1
      UniProtKB/Swiss-Prot
      Q80YD1
      Related
      ENSMUSP00000020273, OTTMUSP00000018795, ENSMUST00000020273, OTTMUST00000041801
      Conserved Domains (3) summary
      smart00487
      Location:187353
      DEXDc; DEAD-like helicases superfamily
      cd00079
      Location:351486
      HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
      pfam12513
      Location:626672
      SUV3_C; Mitochondrial degradasome RNA helicase subunit C terminal

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000076.6 Reference GRCm38.p4 C57BL/6J

      Range
      62429329..62451295 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006513809.1XP_006513872.1  ATP-dependent RNA helicase SUPV3L1, mitochondrial isoform X1

      Conserved Domains (3) summary
      COG0513
      Location:43261
      SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
      cd00079
      Location:112247
      HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
      pfam12513
      Location:387433
      SUV3_C; Mitochondrial degradasome RNA helicase subunit C terminal

    RNA

    1. XR_001779543.1 RNA Sequence

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