Format

Send to:

Choose Destination

Links from PubMed

    • Showing Current items.

    tspan8.L tetraspanin 8 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 380553, updated on 8-Apr-2017
    Symbol
    tspan8.L
    Full Name
    tetraspanin 8 L homeolog
    Primary source
    Xenbase:XB-GENE-1016297
    Locus tag
    XELAEV_18017556mg
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    tm4sf3; tspan8
    See tspan8.L in Genome Data Viewer
    Location:
    chromosome: 3L
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (51958027..51980310, complement)

    Chromosome 3L - NC_030728.1Genomic Context describing neighboring genes Neighboring gene receptor-type tyrosine-protein phosphatase beta-like Neighboring gene protein tyrosine phosphatase, receptor type R L homeolog Neighboring gene uncharacterized LOC108711101 Neighboring gene leucine-rich repeat containing G protein-coupled receptor 5 L homeolog

    Genomic Sequence:
    NC_030728.1 Chromosome 3L Reference Xenopus_laevis_v2 Primary Assembly

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Preferred Names
    tetraspanin 8 L homeolog
    Names
    transmembrane 4 superfamily member 3

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001087390.1NP_001080859.1  tetraspanin 8 L homeolog

      See identical proteins and their annotated locations for NP_001080859.1

      Status: PROVISIONAL

      Source sequence(s)
      BC054295
      UniProtKB/TrEMBL
      Q7SYR5
      Conserved Domains (2) summary
      cd03154
      Location:101196
      TM4SF3_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF3_like subfamily. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
      pfam00335
      Location:7224
      Tetraspannin; Tetraspanin family

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v2 Primary Assembly

    Genomic

    1. NC_030728.1 Reference Xenopus_laevis_v2 Primary Assembly

      Range
      51958027..51980310 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Support Center