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    Kif12 kinesin family member 12 [ Mus musculus (house mouse) ]

    Gene ID: 16552, updated on 22-Sep-2017
    Official Symbol
    Kif12provided by MGI
    Official Full Name
    kinesin family member 12provided by MGI
    Primary source
    MGI:MGI:1098232
    See related
    Ensembl:ENSMUSG00000028357 Vega:OTTMUSG00000000243
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Orthologs
    Location:
    4; 4 B3
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 4 NC_000070.6 (63157948..63172146, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (62826671..62833165, complement)

    Chromosome 4 - NC_000070.6Genomic Context describing neighboring genes Neighboring gene zinc finger protein 618 Neighboring gene predicted gene, 30764 Neighboring gene alpha 1 microglobulin/bikunin Neighboring gene collagen, type XXVII, alpha 1 Neighboring gene microRNA 455 Neighboring gene orosomucoid 1

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    ATPase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    microtubule binding IEA
    Inferred from Electronic Annotation
    more info
     
    microtubule motor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    microtubule-based movement IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    extracellular exosome ISO
    Inferred from Sequence Orthology
    more info
     
    kinesin complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    microtubule IEA
    Inferred from Electronic Annotation
    more info
     
    microtubule organizing center IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Preferred Names
    kinesin-like protein KIF12
    Names
    N-9 kinesin
    kinesin 12
    kinesin superfamily protein 12

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001317352.1NP_001304281.1  kinesin-like protein KIF12 isoform 1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) encodes the longer isoform (1).
      Source sequence(s)
      AL691496
      UniProtKB/TrEMBL
      A0A1Y7VK29
      Related
      ENSMUSP00000152690.1, ENSMUST00000156618.8
      Conserved Domains (3) summary
      cd00106
      Location:25358
      KISc; Kinesin motor domain
      pfam00225
      Location:31360
      Kinesin; Kinesin motor domain
      pfam12711
      Location:379464
      Kinesin-relat_1; Kinesin motor
    2. NM_010616.3NP_034746.1  kinesin-like protein KIF12 isoform 2

      See identical proteins and their annotated locations for NP_034746.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 3' coding region compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
      Source sequence(s)
      AK018598, BP765257
      Consensus CDS
      CCDS18249.1
      UniProtKB/Swiss-Prot
      Q9D2Z8
      Related
      ENSMUSP00000030042.2, OTTMUSP00000000311, ENSMUST00000030042.2, OTTMUST00000000700
      Conserved Domains (3) summary
      cd00106
      Location:25358
      KISc; Kinesin motor domain
      pfam00225
      Location:31360
      Kinesin; Kinesin motor domain
      pfam12711
      Location:379464
      Kinesin-relat_1; Kinesin motor

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000070.6 Reference GRCm38.p4 C57BL/6J

      Range
      63157948..63172146 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017319998.1XP_017175487.1  kinesin-like protein KIF12 isoform X1

    2. XM_017319999.1XP_017175488.1  kinesin-like protein KIF12 isoform X2

    3. XM_017320000.1XP_017175489.1  kinesin-like protein KIF12 isoform X3

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