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    Tchh trichohyalin [ Mus musculus (house mouse) ]

    Gene ID: 99681, updated on 22-Apr-2017
    Official Symbol
    Tchhprovided by MGI
    Official Full Name
    trichohyalinprovided by MGI
    Primary source
    MGI:MGI:2177944
    See related
    Ensembl:ENSMUSG00000052415 Vega:OTTMUSG00000051989
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AHF; Thh; AI597080
    Orthologs
    Location:
    3; 3 F2.1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 3 NC_000069.6 (93442330..93449077)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 3 NC_000069.5 (93246252..93252999)

    Chromosome 3 - NC_000069.6Genomic Context describing neighboring genes Neighboring gene mortality factor 4 like 2 pseudogene Neighboring gene predicted pseudogene 5278 Neighboring gene trichohyalin-like 1 Neighboring gene S100 calcium binding protein A11

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Preferred Names
    trichohyalin
    Names
    hair follicle protein AHF

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001163098.1NP_001156570.1  trichohyalin

      See identical proteins and their annotated locations for NP_001156570.1

      Status: VALIDATED

      Source sequence(s)
      AC123859
      Consensus CDS
      CCDS50980.1
      UniProtKB/TrEMBL
      A0A0B4J1F9
      Related
      ENSMUSP00000069525.5, OTTMUSP00000070052, ENSMUST00000064257.5, OTTMUST00000130806
      Conserved Domains (3) summary
      cd00213
      Location:289
      S-100; S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 ...
      cd16269
      Location:310321
      GBP_C; coiled coil [structural motif]
      cl20817
      Location:246335
      GBP_C; Guanylate-binding protein, C-terminal domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000069.6 Reference GRCm38.p4 C57BL/6J

      Range
      93442330..93449077
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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