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    emb-27 Cell division cycle protein 16 homolog [ Caenorhabditis elegans ]

    Gene ID: 174314, updated on 5-Nov-2017
    Gene symbol
    emb-27
    Gene description
    Cell division cycle protein 16 homolog
    Primary source
    WormBase:WBGene00001281
    Locus tag
    CELE_F10B5.6
    Gene type
    protein coding
    RNA name
    Cell division cycle protein 16 homolog
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Location:
    chromosome: II
    Exon count:
    7
    Sequence:
    Chromosome: II; NC_003280.10 (8159929..8162169, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene TMEM (human TransMEMbrane protein) homolog Neighboring gene Putative pachytene checkpoint protein 2 Neighboring gene RNA-dependent RNA polymerase Family Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    • Ubiquitin mediated proteolysis, organism-specific biosystem (from KEGG)
      Ubiquitin mediated proteolysis, organism-specific biosystemProtein ubiquitination plays an important role in eukaryotic cellular processes. It mainly functions as a signal for 26S proteasome dependent protein degradation. The addition of ubiquitin to protein...
    • Ubiquitin mediated proteolysis, conserved biosystem (from KEGG)
      Ubiquitin mediated proteolysis, conserved biosystemProtein ubiquitination plays an important role in eukaryotic cellular processes. It mainly functions as a signal for 26S proteasome dependent protein degradation. The addition of ubiquitin to protein...
    Products Interactant Other Gene Complex Source Pubs Description

    Markers

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    cell cycle IEA
    Inferred from Electronic Annotation
    more info
     
    cell division IEA
    Inferred from Electronic Annotation
    more info
     
    eggshell formation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    embryo development ending in birth or egg hatching IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    gonad development IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    hermaphrodite genitalia development IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    meiotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    mitotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    mitotic spindle organization IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
     
    neurotransmitter transport IEA
    Inferred from Electronic Annotation
    more info
     
    protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    reproduction IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cell junction IEA
    Inferred from Electronic Annotation
    more info
     
    synapse IDA
    Inferred from Direct Assay
    more info
    PubMed 
    synapse IEA
    Inferred from Electronic Annotation
    more info
     
    Names
    Cell division cycle protein 16 homolog
    NP_495712.1
    • Confirmed by transcript evidence

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      8159929..8162169 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_063311.7NP_495712.1  Cell division cycle protein 16 homolog [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_495712.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      G5EG38
      Conserved Domains (4) summary
      smart00028
      Location:498528
      TPR; Tetratricopeptide repeats
      TIGR02552
      Location:346443
      LcrH_SycD; type III secretion low calcium response chaperone LcrH/SycD
      sd00006
      Location:498523
      TPR; TPR repeat [structural motif]
      pfam13414
      Location:498560
      TPR_11; TPR repeat
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