Format

Send to:

Choose Destination

Links from PubMed

    • Showing Current items.

    ZNF350 zinc finger protein 350 [ Homo sapiens (human) ]

    Gene ID: 59348, updated on 25-May-2017
    Official Symbol
    ZNF350provided by HGNC
    Official Full Name
    zinc finger protein 350provided by HGNC
    Primary source
    HGNC:HGNC:16656
    See related
    Ensembl:ENSG00000256683 MIM:605422; Vega:OTTHUMG00000182538
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    ZFQR; ZBRK1
    Orthologs
    Location:
    19q13.41
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    108 current GRCh38.p7 (GCF_000001405.33) 19 NC_000019.10 (51964340..51986876, complement)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (52467593..52490079, complement)

    Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene zinc finger protein 41 pseudogene Neighboring gene zinc finger protein 613 Neighboring gene ZNF350 antisense RNA 1 Neighboring gene zinc finger protein 615 Neighboring gene uncharacterized LOC107985292 Neighboring gene zinc finger protein 614

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Jun 15 11:32:44 2016

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    • Gene Expression, organism-specific biosystem (from REACTOME)
      Gene Expression, organism-specific biosystemGene Expression covers the pathways by which genomic DNA is transcribed to yield RNA, the regulation of these transcription processes, and the pathways by which newly-made RNA Transcripts are process...
    • Generic Transcription Pathway, organism-specific biosystem (from REACTOME)
      Generic Transcription Pathway, organism-specific biosystemOVERVIEW OF TRANSCRIPTION REGULATION: Detailed studies of gene transcription regulation in a wide variety of eukaryotic systems has revealed the general principles and mechanisms by which cell- or t...
    Products Interactant Other Gene Complex Source Pubs Description

    Markers

    Homology

    Gene Ontology Provided by GOA

    Component Evidence Code Pubs
    nuclear body IDA
    Inferred from Direct Assay
    more info
     
    nuclear matrix IEA
    Inferred from Electronic Annotation
    more info
     
    nucleoplasm IDA
    Inferred from Direct Assay
    more info
     
    nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    transcriptional repressor complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Preferred Names
    zinc finger protein 350
    Names
    KRAB zinc finger protein ZFQR
    zinc finger and BRCA1-interacting protein with a KRAB domain 1
    zinc finger protein ZBRK1

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_021632.3NP_067645.3  zinc finger protein 350

      See identical proteins and their annotated locations for NP_067645.3

      Status: VALIDATED

      Source sequence(s)
      AF309561, AU135269, BC009921, BM674621
      Consensus CDS
      CCDS12845.1
      UniProtKB/Swiss-Prot
      Q9GZX5
      Related
      ENSP00000243644.3, OTTHUMP00000269525, ENST00000243644.8, OTTHUMT00000462278
      Conserved Domains (6) summary
      smart00349
      Location:968
      KRAB; krueppel associated box
      COG5048
      Location:160422
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:236256
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:346368
      zf-C2H2; Zinc finger, C2H2 type
      pfam01352
      Location:947
      KRAB; KRAB box
      pfam13465
      Location:248271
      zf-H2C2_2; Zinc-finger double domain

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 108 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p7 Primary Assembly

    Genomic

    1. NC_000019.10 Reference GRCh38.p7 Primary Assembly

      Range
      51964340..51986876 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017027102.1XP_016882591.1  zinc finger protein 350 isoform X5

    2. XM_017027103.1XP_016882592.1  zinc finger protein 350 isoform X5

    3. XM_017027104.1XP_016882593.1  zinc finger protein 350 isoform X5

    4. XM_017027097.1XP_016882586.1  zinc finger protein 350 isoform X2

    5. XM_017027094.1XP_016882583.1  zinc finger protein 350 isoform X1

    6. XM_011527196.1XP_011525498.1  zinc finger protein 350 isoform X4

      Conserved Domains (5) summary
      smart00349
      Location:132
      KRAB; krueppel associated box
      COG5048
      Location:124386
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:200220
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:310332
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:212235
      zf-H2C2_2; Zinc-finger double domain
    7. XM_017027098.1XP_016882587.1  zinc finger protein 350 isoform X3

      UniProtKB/Swiss-Prot
      Q9GZX5
      Conserved Domains (6) summary
      smart00349
      Location:968
      KRAB; krueppel associated box
      COG5048
      Location:160422
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:236256
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:346368
      zf-C2H2; Zinc finger, C2H2 type
      pfam01352
      Location:947
      KRAB; KRAB box
      pfam13465
      Location:248271
      zf-H2C2_2; Zinc-finger double domain
    8. XM_017027099.1XP_016882588.1  zinc finger protein 350 isoform X3

      UniProtKB/Swiss-Prot
      Q9GZX5
      Conserved Domains (6) summary
      smart00349
      Location:968
      KRAB; krueppel associated box
      COG5048
      Location:160422
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:236256
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:346368
      zf-C2H2; Zinc finger, C2H2 type
      pfam01352
      Location:947
      KRAB; KRAB box
      pfam13465
      Location:248271
      zf-H2C2_2; Zinc-finger double domain
    9. XM_017027101.1XP_016882590.1  zinc finger protein 350 isoform X5

    10. XM_017027100.1XP_016882589.1  zinc finger protein 350 isoform X3

      UniProtKB/Swiss-Prot
      Q9GZX5
      Conserved Domains (6) summary
      smart00349
      Location:968
      KRAB; krueppel associated box
      COG5048
      Location:160422
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:236256
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:346368
      zf-C2H2; Zinc finger, C2H2 type
      pfam01352
      Location:947
      KRAB; KRAB box
      pfam13465
      Location:248271
      zf-H2C2_2; Zinc-finger double domain
    11. XM_017027096.1XP_016882585.1  zinc finger protein 350 isoform X1

    12. XM_017027095.1XP_016882584.1  zinc finger protein 350 isoform X1

    Alternate CHM1_1.1

    Genomic

    1. NC_018930.2 Alternate CHM1_1.1

      Range
      52469450..52491938 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Support Center