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    CLV1 Leucine-rich receptor-like protein kinase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843915, updated on 5-Nov-2017
    Gene symbol
    CLV1
    Gene description
    Leucine-rich receptor-like protein kinase family protein
    Primary source
    Araport:AT1G75820
    Locus tag
    AT1G75820
    Gene type
    protein coding
    RNA name
    Leucine-rich receptor-like protein kinase family protein
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATCLV1; CLAVATA 1; CLV1 RECEPTOR KINASE PRECURSOR; FAS3; FASCIATA 3; FLO5; FLOWER DEVELOPMENT 5; T4O12.5; T4O12_5
    Summary
    Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain.
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (28463344..28466971, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Pathogenesis-related thaumatin superfamily protein Neighboring gene transmembrane protein Neighboring gene ncRNA Neighboring gene ncRNA

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Products Interactant Other Gene Complex Source Pubs Description
    NM_106232.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    ATP binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    protein self-association IDA
    Inferred from Direct Assay
    more info
    PubMed 
    protein serine/threonine kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    receptor serine/threonine kinase binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    signal transducer, downstream of receptor, with serine/threonine kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Process Evidence Code Pubs
    cell differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    cell differentiation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    protein phosphorylation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    regulation of meristem structural organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    signal complex assembly IDA
    Inferred from Direct Assay
    more info
    PubMed 
    transmembrane receptor protein tyrosine kinase signaling pathway ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    integral component of membrane TAS
    Traceable Author Statement
    more info
    PubMed 
    membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    plant-type vacuole IDA
    Inferred from Direct Assay
    more info
    PubMed 
    plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    plasma membrane ISM
    Inferred from Sequence Model
    more info
     
    plasmodesma IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Names
    Leucine-rich receptor-like protein kinase family protein
    NP_177710.1
    • CLAVATA 1 (CLV1); CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G65700.2); Has 209359 Blast hits to 134993 proteins in 4611 species: Archae - 138; Bacteria - 19949; Metazoa - 62202; Fungi - 10385; Plants - 91018; Viruses - 406; Other Eukaryotes - 25261 (source: NCBI BLink).

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      28463344..28466971 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106232.4NP_177710.1  Leucine-rich receptor-like protein kinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177710.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SYQ8
      UniProtKB/TrEMBL
      A0A178W3N9, C0LGJ2
      Conserved Domains (5) summary
      PLN00113
      Location:22973
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      cd00116
      Location:115397
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      cd14664
      Location:698970
      STK_BAK1_like; Catalytic domain of the Serine/Threonine Kinase, BRI1 associated kinase 1 and related STKs
      sd00033
      Location:267290
      LRR_RI; leucine-rich repeat [structural motif]
      pfam08263
      Location:2667
      LRRNT_2; Leucine rich repeat N-terminal domain
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