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    Slc20a2 solute carrier family 20 member 2 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 29502, updated on 9-Jul-2017
    Official Symbol
    Slc20a2provided by RGD
    Official Full Name
    solute carrier family 20 member 2provided by RGD
    Primary source
    RGD:3699
    See related
    Ensembl:ENSRNOG00000019490
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Ram1; Glvr2; Pit-2; RAM-1; Ab1-188
    Summary
    cellular receptor which mediates virus entry [RGD, Feb 2006]
    Annotation information
    Annotation category: suggests misassembly
    Orthologs
    Location:
    16q12.5
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    106 current Rnor_6.0 (GCF_000001895.5) 16 NC_005115.4 (74318287..74408030, complement)
    104 previous assembly Rnor_5.0 (GCF_000001895.4) 16 NC_005115.3 (73949883..74042911, complement)

    Chromosome 16 - NC_005115.4Genomic Context describing neighboring genes Neighboring gene dickkopf WNT signaling pathway inhibitor 4 Neighboring gene serine/arginine repetitive matrix protein 1-like Neighboring gene voltage-dependent anion channel 3 Neighboring gene small integral membrane protein 19 Neighboring gene mitochondrial ribosomal protein S31

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Products Interactant Other Gene Complex Source Pubs Description

    Markers

    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    inorganic phosphate transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    inorganic phosphate transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    sodium:inorganic phosphate symporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    phosphate ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    phosphate ion transport IEA
    Inferred from Electronic Annotation
    more info
     
    sodium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    viral process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    extracellular exosome IEA
    Inferred from Electronic Annotation
    more info
     
    extracellular exosome ISO
    Inferred from Sequence Orthology
    more info
     
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    integral component of membrane TAS
    Traceable Author Statement
    more info
    PubMed 
    integral component of plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Preferred Names
    sodium-dependent phosphate transporter 2
    Names
    gibbon ape leukemia virus receptor 2
    phosphate transporter 2
    receptor for amphitropic viruses 1
    receptor for amphotropic viruses 1
    solute carrier family 20 (phosphate transporter), member 2

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_017223.2NP_058919.1  sodium-dependent phosphate transporter 2 precursor

      See identical proteins and their annotated locations for NP_058919.1

      Status: PROVISIONAL

      Source sequence(s)
      BC070908
      UniProtKB/Swiss-Prot
      Q63488
      Related
      ENSRNOP00000026418.7, ENSRNOT00000026418.7
      Conserved Domains (2) summary
      COG0306
      Location:476648
      PitA; Phosphate/sulfate permease [Inorganic ion transport and metabolism]
      pfam01384
      Location:539637
      PHO4; Phosphate transporter family

    RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Rnor_6.0 Primary Assembly

    Genomic

    1. NC_005115.4 Reference Rnor_6.0 Primary Assembly

      Range
      74318287..74408030 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008771352.2XP_008769574.1  sodium-dependent phosphate transporter 2 isoform X1

      See identical proteins and their annotated locations for XP_008769574.1

      UniProtKB/Swiss-Prot
      Q63488
      Conserved Domains (2) summary
      COG0306
      Location:476648
      PitA; Phosphate/sulfate permease [Inorganic ion transport and metabolism]
      pfam01384
      Location:539637
      PHO4; Phosphate transporter family
    2. XM_008771351.2XP_008769573.1  sodium-dependent phosphate transporter 2 isoform X1

      See identical proteins and their annotated locations for XP_008769573.1

      UniProtKB/Swiss-Prot
      Q63488
      Conserved Domains (2) summary
      COG0306
      Location:476648
      PitA; Phosphate/sulfate permease [Inorganic ion transport and metabolism]
      pfam01384
      Location:539637
      PHO4; Phosphate transporter family
    3. XM_017600054.1XP_017455543.1  sodium-dependent phosphate transporter 2 isoform X1

      UniProtKB/Swiss-Prot
      Q63488
      Conserved Domains (2) summary
      COG0306
      Location:476648
      PitA; Phosphate/sulfate permease [Inorganic ion transport and metabolism]
      pfam01384
      Location:539637
      PHO4; Phosphate transporter family

    Alternate Rn_Celera

    Genomic

    1. AC_000084.1 Alternate Rn_Celera

      Range
      67353947..67441733 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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