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    SFTPA1 surfactant protein A1 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100009044, updated on 3-Apr-2017
    Gene symbol
    SFTPA1
    Gene description
    surfactant protein A1
    See related
    Ensembl:ENSOCUG00000014929
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    102 current OryCun2.0 (GCF_000003625.3) Unplaced Scaffold NW_003159342.1 (76333..81269, complement)

    NW_003159342.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 254 Neighboring gene surfactant protein D Neighboring gene methionine adenosyltransferase 1A Neighboring gene heterogeneous nuclear ribonucleoprotein A1 pseudogene

    Genomic Sequence:
    NW_003159342.1 Unplaced Scaffold Reference OryCun2.0 Primary Assembly
    • Pertussis, organism-specific biosystem (from KEGG)
      Pertussis, organism-specific biosystemPertussis, also known as whooping cough, is an acute respiratory infectious disease caused by a bacteria called Bordetella Pertussis. The characteristic symptoms are paroxysmal cough, inspiratory whe...
    • Pertussis, conserved biosystem (from KEGG)
      Pertussis, conserved biosystemPertussis, also known as whooping cough, is an acute respiratory infectious disease caused by a bacteria called Bordetella Pertussis. The characteristic symptoms are paroxysmal cough, inspiratory whe...
    • Phagosome, organism-specific biosystem (from KEGG)
      Phagosome, organism-specific biosystemPhagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is...
    • Phagosome, conserved biosystem (from KEGG)
      Phagosome, conserved biosystemPhagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is...
    Preferred Names
    pulmonary surfactant-associated protein A
    Names
    PSAP
    PSP-A
    SP-A
    surfactant, pulmonary-associated protein A1

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001082229.1NP_001075698.1  pulmonary surfactant-associated protein A precursor

      See identical proteins and their annotated locations for NP_001075698.1

      Status: PROVISIONAL

      Source sequence(s)
      J03542
      UniProtKB/Swiss-Prot
      P12842
      Conserved Domains (2) summary
      cd03591
      Location:135247
      CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
      pfam01391
      Location:2799
      Collagen; Collagen triple helix repeat (20 copies)

    RefSeqs of Annotated Genomes: Oryctolagus cuniculus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference OryCun2.0 Primary Assembly

    Genomic

    1. NW_003159342.1 Reference OryCun2.0 Primary Assembly

      Range
      76333..81269 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008274301.2XP_008272523.1  pulmonary surfactant-associated protein A isoform X1

      Related
      ENSOCUP00000012830.3, ENSOCUT00000014923.3
      Conserved Domains (2) summary
      cd03591
      Location:167279
      CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
      pfam01391
      Location:59131
      Collagen; Collagen triple helix repeat (20 copies)
    2. XM_017350523.1XP_017206012.1  pulmonary surfactant-associated protein A isoform X2

      UniProtKB/Swiss-Prot
      P12842
      Conserved Domains (2) summary
      cd03591
      Location:135247
      CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
      pfam01391
      Location:2799
      Collagen; Collagen triple helix repeat (20 copies)
    3. XM_017350524.1XP_017206013.1  pulmonary surfactant-associated protein A isoform X2

      UniProtKB/Swiss-Prot
      P12842
      Conserved Domains (2) summary
      cd03591
      Location:135247
      CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
      pfam01391
      Location:2799
      Collagen; Collagen triple helix repeat (20 copies)
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