Format

Send to:

Choose Destination

Links from PubMed

    • Showing Current items.

    YUC6 Flavin-binding monooxygenase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832638, updated on 28-Mar-2017
    Gene symbol
    YUC6
    Gene description
    Flavin-binding monooxygenase family protein
    Primary source
    Araport:AT5G25620
    Locus tag
    AT5G25620
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtYUC6; T14C9.160; T14C9_160; YUCCA6
    See YUC6 in Map Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (8934941..8938768, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene hypothetical protein Neighboring gene tRNA Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene Rhomboid-related intramembrane serine protease family protein

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    NM_001203470.1
    NM_122473.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    N,N-dimethylaniline monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
     
    NADP binding IEA
    Inferred from Electronic Annotation
    more info
     
    flavin adenine dinucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    indole-3-pyruvate monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
     
    monooxygenase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    auxin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    auxin biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    oxidation-reduction process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    Names
    Flavin-binding monooxygenase family protein
    NP_001190399.2
    • YUCCA6 (YUC6); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: auxin biosynthetic process; EXPRESSED IN: sepal; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT4G13260.1).
    NP_197944.2
    • YUCCA6 (YUC6); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: auxin biosynthetic process; EXPRESSED IN: sepal; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT4G13260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      8934941..8938768 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_122473.3NP_197944.2  Flavin-binding monooxygenase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197944.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8VZ59
      Conserved Domains (2) summary
      pfam13434
      Location:33346
      K_oxygenase; L-lysine 6-monooxygenase (NADPH-requiring)
      cl21454
      Location:33236
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
    2. NM_001203470.1NP_001190399.2  Flavin-binding monooxygenase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4JY69
    Support Center