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    AaeL_AAEL002049 AAEL002049-PA [ Aedes aegypti (yellow fever mosquito) ]

    Gene ID: 5573421, updated on 10-Sep-2016
    Gene symbol
    AaeL_AAEL002049
    Gene description
    AAEL002049-PA
    Primary source
    VectorBase:AAEL002049
    Locus tag
    AaeL_AAEL002049
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Aedes aegypti (strain: Liverpool)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Aedini; Aedes; Stegomyia
    See AaeL_AAEL002049 in Map Viewer
    Location:
    chromosome: 2
    Exon count:
    10

    NW_001811218.1Genomic Context describing neighboring genes Neighboring gene AAEL002063-PA Neighboring gene AAEL002050-PA Neighboring gene AAEL002043-PA Neighboring gene AAEL002067-PA Neighboring gene AAEL002071-PA

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    • Circadian rhythm - fly, organism-specific biosystem (from KEGG)
      Circadian rhythm - fly, organism-specific biosystemCircadian rhythm is an internal biological clock, which enables to sustain an approximately 24-hour rhythm in the absence of environmental cues. In the fruit fly Drosophila melanogaster, seven genes ...
    Names
    AAEL002049-PA
    AAEL002049-PB
    XP_001654596.1
    • AAEL002049-PA encoded by AAEL002049-RA
    XP_001654597.1
    • AAEL002049-PB encoded by AAEL002049-RB

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001811218.1 Reference assembly

      Range
      2185939..2218168
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001654546.1XP_001654596.1  AAEL002049-PA, partial [Aedes aegypti]

      See identical proteins and their annotated locations for XP_001654596.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q17JB2
      Conserved Domains (5) summary
      smart00091
      Location:107165
      PAS; PAS domain
      cd00083
      Location:2787
      HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
      cd00130
      Location:313408
      PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
      pfam00989
      Location:108210
      PAS; PAS fold
      pfam14598
      Location:312414
      PAS_11; PAS domain
    2. XM_001654547.1XP_001654597.1  AAEL002049-PB, partial [Aedes aegypti]

      See identical proteins and their annotated locations for XP_001654597.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q17JB1
      Conserved Domains (5) summary
      smart00091
      Location:107165
      PAS; PAS domain
      cd00083
      Location:2787
      HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
      cd00130
      Location:313408
      PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
      pfam00989
      Location:108210
      PAS; PAS fold
      pfam14598
      Location:312414
      PAS_11; PAS domain
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