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    cid1 poly(A) polymerase Cid1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2542420, updated on 5-Nov-2017
    Gene symbol
    cid1
    Gene description
    poly(A) polymerase Cid1
    Locus tag
    SPAC19D5.03
    Gene type
    protein coding
    RNA name
    poly(A) polymerase Cid1
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Location:
    chromosome: I
    Exon count:
    3
    Sequence:
    Chromosome: I; NC_003424.3 (5206595..5208422)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene miscRNA Neighboring gene tyrosine phosphatase Pyp2 Neighboring gene peroxisomal membrane protein Pex22 (predicted) Neighboring gene E3 ubiquitin-protein ligase Neighboring gene miscRNA Neighboring gene U3 snoRNP-associated protein Imp3 (predicted) Neighboring gene DNA replication factor C complex subunit Ctf8 (predicted)

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Products Interactant Other Gene Complex Source Pubs Description

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    RNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    RNA uridylyltransferase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    RNA uridylyltransferase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    UTP binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    magnesium ion binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    polynucleotide adenylyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    RNA 3' uridylation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    polyuridylation-dependent decapping of nuclear-transcribed mRNA IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      5206595..5208422
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001020330.2NP_594901.1  poly(A) polymerase Cid1 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_594901.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O13833
      Conserved Domains (3) summary
      cd05402
      Location:65178
      NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
      COG5260
      Location:1405
      TRF4; DNA polymerase sigma [Replication, recombination and repair]
      pfam03828
      Location:267336
      PAP_assoc; Cid1 family poly A polymerase
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