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    Nrn1 neuritin 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 83834, updated on 25-May-2017
    Official Symbol
    Nrn1provided by RGD
    Official Full Name
    neuritin 1provided by RGD
    Primary source
    RGD:621586
    See related
    Ensembl:ENSRNOG00000050767
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Nrn
    Summary
    promotes neurite outgrowth [RGD, Feb 2006]
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    Location:
    17p12
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current Rnor_6.0 (GCF_000001895.5) 17 NC_005116.4 (27925054..28002946, complement)
    104 previous assembly Rnor_5.0 (GCF_000001895.4) 17 NC_005116.3 (29834673..29910519, complement)

    Chromosome 17 - NC_005116.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100909970 Neighboring gene ferritin light chain 1-like Neighboring gene similar to Ferritin light chain 1 (Ferritin L subunit 1) Neighboring gene uncharacterized LOC102549751 Neighboring gene uncharacterized LOC108348548 Neighboring gene uncharacterized LOC100910628

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Markers

    Homology

    Clone Names

    • MGC105351

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    protein heterodimerization activity IEA
    Inferred from Electronic Annotation
    more info
     
    protein heterodimerization activity ISO
    Inferred from Sequence Orthology
    more info
     
    protein homodimerization activity IEA
    Inferred from Electronic Annotation
    more info
     
    protein homodimerization activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    nervous system development IDA
    Inferred from Direct Assay
    more info
    PubMed 
    neuron projection extension IEA
    Inferred from Electronic Annotation
    more info
     
    neuron projection extension ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    AMPA glutamate receptor complex IEA
    Inferred from Electronic Annotation
    more info
     
    AMPA glutamate receptor complex ISO
    Inferred from Sequence Orthology
    more info
     
    anchored component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    anchored component of plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    anchored component of plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    cell junction IEA
    Inferred from Electronic Annotation
    more info
     
    extracellular space IEA
    Inferred from Electronic Annotation
    more info
     
    extracellular space ISO
    Inferred from Sequence Orthology
    more info
     
    plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    synapse IEA
    Inferred from Electronic Annotation
    more info
     

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_053346.1NP_445798.1  neuritin precursor

      See identical proteins and their annotated locations for NP_445798.1

      Status: PROVISIONAL

      Source sequence(s)
      U88958
      UniProtKB/Swiss-Prot
      O08957
      Related
      ENSRNOP00000066878.1, ENSRNOT00000073967.1
      Conserved Domains (1) summary
      pfam15056
      Location:31117
      NRN1; Neuritin protein family

    RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Rnor_6.0 Primary Assembly

    Genomic

    1. NC_005116.4 Reference Rnor_6.0 Primary Assembly

      Range
      27925054..28002946 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Rn_Celera

    Genomic

    1. AC_000085.1 Alternate Rn_Celera

      Range
      27746113..27755014
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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