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    rpoS RNA polymerase, sigma S (sigma 38) factor [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947210, updated on 16-Sep-2017
    Gene symbol
    rpoS
    Gene description
    RNA polymerase, sigma S (sigma 38) factor
    Primary source
    EcoGene:EG10510
    Locus tag
    b2741
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
    Also known as
    abrD; appR; csi2; dpeB; ECK2736; JW5437; katF; nur; otsX; sigS
    Summary
    Polyamine modulon. [More information is available at EcoGene: EG10510]. rpoS encodes the alternative sigma factor S, a subunit of RNA polymerase that acts as the master regulator of the general stress response in Escherichia coli. [More information is available at EcoCyc: EG10510].
    Sequence:
    NC_000913.3 (2866559..2867551, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative hydroxypyruvate isomerase Neighboring gene putative transporter Neighboring gene activator of AmiC murein hydrolase activity, lipoprotein Neighboring gene L-isoaspartate protein carboxylmethyltransferase type II Neighboring gene broad specificity 5'(3')-nucleotidase and polyphosphatase

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    • Biofilm formation - Escherichia coli, organism-specific biosystem (from KEGG)
      Biofilm formation - Escherichia coli, organism-specific biosystemBacteria inhabiting a biofilm are protected from physical stress, antimicrobials, and the host immune system, and thereby cause severe medical, environmental, and technical problems. Biofilm formatio...
    • Biofilm formation - Escherichia coli, conserved biosystem (from KEGG)
      Biofilm formation - Escherichia coli, conserved biosystemBacteria inhabiting a biofilm are protected from physical stress, antimicrobials, and the host immune system, and thereby cause severe medical, environmental, and technical problems. Biofilm formatio...
    Products Interactant Other Gene Complex Source Pubs Description
    Names
    RNA polymerase, sigma S (sigma 38) factor
    NP_417221.1
    • RNA polymerase, sigma S (sigma38) factor; synthesis of many growth phase related proteins

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2866559..2867551 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417221.1 RNA polymerase, sigma S (sigma 38) factor [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417221.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P13445
      Conserved Domains (1) summary
      PRK05657
      Location:4328
      PRK05657; RNA polymerase sigma factor RpoS; Validated
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