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    ry rosy [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41605, updated on 9-Apr-2017
    Official Symbol
    ryprovided by FlyBase
    Official Full Name
    rosyprovided by FlyBase
    Primary source
    FLYBASE:FBgn0003308
    Locus tag
    Dmel_CG7642
    Gene type
    protein coding
    RNA name
    rosy
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster (old-lineage: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG7642; Dmel\CG7642; Ry; xdh; Xdh; XDH; Xdh/ry; XOR
    Location:
    87D9-87D9; 3-52.0 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.13 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (13032528..13038020)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (8858250..8863742)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene CG46280 gene product from transcript CG46280-RB Neighboring gene CG46281 gene product from transcript CG46281-RA Neighboring gene lethal (3) 87Df Neighboring gene CG11668 gene product from transcript CG11668-RA Neighboring gene snake Neighboring gene CG11670 gene product from transcript CG11670-RD

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Products Interactant Other Gene Complex Source Pubs Description

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    2 iron, 2 sulfur cluster binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    electron carrier activity IEA
    Inferred from Electronic Annotation
    more info
     
    flavin adenine dinucleotide binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    flavin adenine dinucleotide binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    iron ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    molybdopterin cofactor binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    oxidoreductase activity, acting on CH-OH group of donors IEA
    Inferred from Electronic Annotation
    more info
     
    oxidoreductase activity, acting on the aldehyde or oxo group of donors IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    xanthine dehydrogenase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    xanthine dehydrogenase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    xanthine oxidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    arginine metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    compound eye pigmentation TAS
    Traceable Author Statement
    more info
    PubMed 
    determination of adult lifespan IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    glycerophospholipid metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    oxidation-reduction process IEA
    Inferred from Electronic Annotation
    more info
     
    purine nucleobase metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    pyrimidine nucleobase metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    response to ethanol IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    tryptophan metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    xanthine catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    xanthine catabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    microtubule associated complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Preferred Names
    CG7642 gene product from transcript CG7642-RA
    Names
    CG7642-PA
    rosy
    ry-PA
    xanthine DH
    xanthine dehydrogenase
    NP_524337.1

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      13032528..13038020
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079613.3NP_524337.1  rosy [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524337.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P10351
      Related
      FBpp0082172, FBtr0082704
      Conserved Domains (7) summary
      PLN02906
      Location:251317
      PLN02906; xanthine dehydrogenase
      pfam00111
      Location:878
      Fer2; 2Fe-2S iron-sulfur cluster binding domain
      pfam00941
      Location:231411
      FAD_binding_5; FAD binding domain in molybdopterin dehydrogenase
      pfam01315
      Location:589696
      Ald_Xan_dh_C; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
      pfam01799
      Location:87158
      Fer2_2; [2Fe-2S] binding domain
      pfam02738
      Location:7161242
      Ald_Xan_dh_C2; Molybdopterin-binding domain of aldehyde dehydrogenase
      pfam03450
      Location:422525
      CO_deh_flav_C; CO dehydrogenase flavoprotein C-terminal domain
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