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    Mb myoglobin [ Mus musculus (house mouse) ]

    Gene ID: 17189, updated on 22-Apr-2017
    Official Symbol
    Mbprovided by MGI
    Official Full Name
    myoglobinprovided by MGI
    Primary source
    MGI:MGI:96922
    See related
    Ensembl:ENSMUSG00000018893
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AI325109
    Orthologs
    Location:
    15 D3; 15 36.36 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 15 NC_000081.6 (77015487..77050668, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (76845917..76881098, complement)

    Chromosome 15 - NC_000081.6Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1110038F14 gene Neighboring gene predicted gene, 46534 Neighboring gene predicted gene, 35933 Neighboring gene RIKEN cDNA 1700109K24 gene Neighboring gene apolipoprotein L 6 Neighboring gene RNA binding protein, fox-1 homolog (C. elegans) 2 Neighboring gene predicted gene, 41352

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    heme binding IEA
    Inferred from Electronic Annotation
    more info
     
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    oxygen binding ISO
    Inferred from Sequence Orthology
    more info
     
    oxygen transporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    brown fat cell differentiation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enucleate erythrocyte differentiation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    heart development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    oxygen transport ISO
    Inferred from Sequence Orthology
    more info
     
    response to hormone ISO
    Inferred from Sequence Orthology
    more info
     
    response to hydrogen peroxide ISO
    Inferred from Sequence Orthology
    more info
     
    response to hypoxia IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    extracellular exosome ISO
    Inferred from Sequence Orthology
    more info
     

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001164047.1NP_001157519.1  myoglobin

      See identical proteins and their annotated locations for NP_001157519.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longest transcript. Variants 1, 2, and 3 all encode the same protein.
      Source sequence(s)
      AC157554, AK137456, BX527493
      Consensus CDS
      CCDS27597.1
      UniProtKB/Swiss-Prot
      P04247
      UniProtKB/TrEMBL
      Q3UVB1
      Related
      ENSMUSP00000125995.1, ENSMUST00000169226.7
      Conserved Domains (1) summary
      cl21461
      Location:6154
      Globin_like; Globin-like proteins
    2. NM_001164048.1NP_001157520.1  myoglobin

      See identical proteins and their annotated locations for NP_001157520.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) differs in the 5' UTR, compared to variant 1. Variants 1, 2, and 3 all encode the same protein.
      Source sequence(s)
      AA271284, AK137456, BX527493
      Consensus CDS
      CCDS27597.1
      UniProtKB/Swiss-Prot
      P04247
      UniProtKB/TrEMBL
      Q3UVB1
      Related
      ENSMUSP00000019037.8, ENSMUST00000019037.8
      Conserved Domains (1) summary
      cl21461
      Location:6154
      Globin_like; Globin-like proteins
    3. NM_013593.3NP_038621.2  myoglobin

      See identical proteins and their annotated locations for NP_038621.2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) represents use of an alternate promoter and 5' UTR, compared to variant 1. Variants 1, 2, and 3 all encode the same protein.
      Source sequence(s)
      AC157554, AL603843, BX527493
      Consensus CDS
      CCDS27597.1
      UniProtKB/Swiss-Prot
      P04247
      UniProtKB/TrEMBL
      Q3UVB1
      Related
      ENSMUSP00000128399.1, ENSMUST00000166179.7
      Conserved Domains (1) summary
      cl21461
      Location:6154
      Globin_like; Globin-like proteins

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000081.6 Reference GRCm38.p4 C57BL/6J

      Range
      77015487..77050668 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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