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    cmya5 cardiomyopathy associated 5 [ Danio rerio (zebrafish) ]

    Gene ID: 560687, updated on 5-Aug-2017
    Official Symbol
    cmya5provided by ZNC
    Official Full Name
    cardiomyopathy associated 5provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-070630-1
    See related
    Ensembl:ENSDARG00000061379 Vega:OTTDARG00000029181
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    cmya5l; im:6912294
    Location:
    chromosome: 5
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (51848453..51881422)
    105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (51201303..51234829)

    Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene homer scaffolding protein 1b Neighboring gene PAP associated domain containing 4 Neighboring gene metaxin 3 Neighboring gene thrombospondin 4a

    Clone Names

    • MGC195210

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    intracellular IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    cardiomyopathy associated 5
    Names
    cardiomyopathy associated 5 like
    myospryn
    trim76

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001079985.3NP_001073454.3  cardiomyopathy associated 5

      See identical proteins and their annotated locations for NP_001073454.3

      Status: VALIDATED

      Source sequence(s)
      CR626903, CT033828
      UniProtKB/TrEMBL
      B3DJR0
      Related
      ENSDARP00000081901.3, OTTDARP00000047998, ENSDART00000087467.4, OTTDART00000039979
      Conserved Domains (3) summary
      cd00063
      Location:14011484
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd12898
      Location:15791749
      SPRY_PRY_TRIM76; PRY/SPRY domain in tripartite motif-containing protein 76 (TRIM76), also called cardiomyopathy-associated protein 5
      cl23765
      Location:12321356
      iSH2_PI3K_IA_R; Inter-Src homology 2 (iSH2) helical domain of Class IA Phosphoinositide 3-kinase Regulatory subunits

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007116.7 Reference GRCz11 Primary Assembly

      Range
      51848453..51881422
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_002458768.1 RNA Sequence

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