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    fat-1 Omega-3 fatty acid desaturase fat-1 [ Caenorhabditis elegans ]

    Gene ID: 178291, updated on 19-Nov-2016
    Gene symbol
    fat-1
    Gene description
    Omega-3 fatty acid desaturase fat-1
    Primary source
    WormBase:WBGene00001393
    Locus tag
    CELE_Y67H2A.8
    Gene type
    protein coding
    RNA name
    Omega-3 fatty acid desaturase fat-1
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    See fat-1 in Map Viewer
    Location:
    chromosome: IV
    Exon count:
    3
    Sequence:
    Chromosome: IV; NC_003282.8 (13315646..13318606)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene COP-9 SigNalosome subunit Neighboring gene Uncharacterized protein Neighboring gene pseudo Neighboring gene Delta(12) fatty acid desaturase fat-2

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    omega-3 fatty acid desaturase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    fatty acid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    fatty acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    oxidation-reduction process IEA
    Inferred from Electronic Annotation
    more info
     
    unsaturated fatty acid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    unsaturated fatty acid biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    Names
    Omega-3 fatty acid desaturase fat-1
    NP_001023560.1
    • Confirmed by transcript evidence

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      13315646..13318606
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001028389.4NP_001023560.1  Omega-3 fatty acid desaturase fat-1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001023560.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9NEQ0
      Conserved Domains (2) summary
      COG3239
      Location:52387
      DesA; Fatty acid desaturase [Lipid transport and metabolism]
      cd03507
      Location:70338
      Delta12-FADS-like; The Delta12 Fatty Acid Desaturase (Delta12-FADS)-like CD includes the integral-membrane enzymes, delta-12 acyl-lipid desaturases, oleate 12-hydroxylases, omega3 and omega6 fatty acid desaturases, and other related proteins, found in a wide range of ...
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