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    CNGB3 cyclic nucleotide gated channel beta 3 [ Canis lupus familiaris (dog) ]

    Gene ID: 403554, updated on 11-May-2017
    Gene symbol
    CNGB3
    Gene description
    cyclic nucleotide gated channel beta 3
    See related
    Ensembl:ENSCAFG00000008906
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    Location:
    chromosome: 29
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    104 current CanFam3.1 (GCF_000002285.3) 29 NC_006611.3 (32748869..32992279, complement)

    Chromosome 29 - NC_006611.3Genomic Context describing neighboring genes Neighboring gene L-lactate dehydrogenase A-like 6A Neighboring gene regulator of microtubule dynamics 1 Neighboring gene copine 3 Neighboring gene ubiquitin-conjugating enzyme E2 N-like Neighboring gene cyclic nucleotide binding domain containing 1 Neighboring gene ribosomal protein S10 pseudogene

    Genomic Sequence:
    NC_006611.3 Chromosome 29 Reference CanFam3.1 Primary Assembly
    • cAMP signaling pathway, organism-specific biosystem (from KEGG)
      cAMP signaling pathway, organism-specific biosystemcAMP is one of the most common and universal second messengers, and its formation is promoted by adenylyl cyclase (AC) activation after ligation of G protein-coupled receptors (GPCRs) by ligands incl...
    • cAMP signaling pathway, conserved biosystem (from KEGG)
      cAMP signaling pathway, conserved biosystemcAMP is one of the most common and universal second messengers, and its formation is promoted by adenylyl cyclase (AC) activation after ligation of G protein-coupled receptors (GPCRs) by ligands incl...

    Homology

    Gene Ontology Provided by GO

    Function Evidence Code Pubs
    cGMP binding IEA
    Inferred from Electronic Annotation
    more info
     
    intracellular cyclic nucleotide activated cation channel activity IEA
    Inferred from Electronic Annotation
    more info
     
    voltage-gated potassium channel activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    potassium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    regulation of ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    regulation of membrane potential IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    response to stimulus IEA
    Inferred from Electronic Annotation
    more info
     
    visual perception IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    integral component of plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Preferred Names
    cyclic nucleotide-gated cation channel beta-3
    Names
    CNG channel beta-3
    cone photoreceptor cGMP-gated channel subunit beta
    cyclic nucleotide gated channel beta subunit
    cyclic nucleotide-gated cation channel modulatory subunit

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001003030.1NP_001003030.1  cyclic nucleotide-gated cation channel beta-3

      See identical proteins and their annotated locations for NP_001003030.1

      Status: PROVISIONAL

      Source sequence(s)
      AF490511
      UniProtKB/Swiss-Prot
      Q8MJD7
      Related
      ENSCAFP00000013075.3, ENSCAFT00000014134.3
      Conserved Domains (3) summary
      COG0664
      Location:516638
      Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
      cd00038
      Location:519628
      CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
      pfam00520
      Location:233448
      Ion_trans; Ion transport protein

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CanFam3.1 Primary Assembly

    Genomic

    1. NC_006611.3 Reference CanFam3.1 Primary Assembly

      Range
      32748869..32992279 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014109163.1XP_013964638.1  cyclic nucleotide-gated cation channel beta-3 isoform X1

      UniProtKB/TrEMBL
      J9NRR5
      Related
      ENSCAFP00000036190.1, ENSCAFT00000045032.2
      Conserved Domains (3) summary
      COG0664
      Location:516699
      Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
      cd00038
      Location:519628
      CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
      pfam00520
      Location:233448
      Ion_trans; Ion transport protein
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