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    LOC100170728 peroxisomal voltage-dependent anion-selective channel protein [ Glycine max (soybean) ]

    Gene ID: 100170728, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100170728
    Gene description
    peroxisomal voltage-dependent anion-selective channel protein
    Locus tag
    GLYMA_09G240600v4
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    Location:
    chromosome: 9
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 9 NC_038245.2 (46684225..46688161)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 9 NC_038245.1 (46301768..46305704)

    Chromosome 9 - NC_038245.2Genomic Context describing neighboring genes Neighboring gene probable pectate lyase 3 Neighboring gene auxin efflux carrier component Neighboring gene probable serine/threonine-protein kinase PIX7 Neighboring gene thioredoxin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Proteomic analysis of highly purified peroxisomes from etiolated soybean cotyledons. Arai Y, et al. Plant Cell Physiol, 2008 Apr. PMID 18281324

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables voltage-gated monoatomic anion channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in monoatomic anion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial outer membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    peroxisomal voltage-dependent anion-selective channel protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001251448.1 → NP_001238377.1  peroxisomal voltage-dependent anion-selective channel protein

      See identical proteins and their annotated locations for NP_001238377.1

      Status: PROVISIONAL

      Source sequence(s)
      AB331962
      UniProtKB/TrEMBL
      B0M197, C6TE70
      Conserved Domains (1) summary
      pfam01459
      Location:4 → 269
      Porin_3; Eukaryotic porin

    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038245.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      46684225..46688161
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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