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    LOC100813340 60S ribosomal protein L13a [ Glycine max (soybean) ]

    Gene ID: 100813340, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100813340
    Gene description
    60S ribosomal protein L13a
    Locus tag
    GLYMA_16G092800v4
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    Location:
    chromosome: 16
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 16 NC_038252.2 (14911922..14914543, complement)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 16 NC_038252.1 (14809053..14811367, complement)

    Chromosome 16 - NC_038252.2Genomic Context describing neighboring genes Neighboring gene probable LRR receptor-like serine/threonine-protein kinase At5g48740 Neighboring gene bZIP transcription factor bZIP69 Neighboring gene uncharacterized LOC112999748 Neighboring gene protein ENHANCED DISEASE RESISTANCE 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    60S ribosomal protein L13a
    Names
    60S ribosomal protein L13a-4-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001289209.2 → NP_001276138.2  60S ribosomal protein L13a

      Status: VALIDATED

      Source sequence(s)
      ACUP04005719, AK287415
      UniProtKB/TrEMBL
      C6TFI1, I1MMC9
      Conserved Domains (1) summary
      PTZ00068
      Location:10 → 194
      PTZ00068; 60S ribosomal protein L13a; Provisional

    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038252.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      14911922..14914543 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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