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    PF3D7_1342000 40S ribosomal protein S6 [ Plasmodium falciparum 3D7 ]

    Gene ID: 814195, updated on 16-Oct-2023

    Summary

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    Gene symbol
    PF3D7_1342000
    Gene description
    40S ribosomal protein S6
    Locus tag
    PF3D7_1342000
    Gene type
    protein coding
    RNA name
    40S ribosomal protein S6
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
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    Genomic context

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    See PF3D7_1342000 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    1
    Sequence:
    Chromosome: 13; NC_004331.3 (1653211..1654131, complement)

    Chromosome 13 - NC_004331.3Genomic Context describing neighboring genes Neighboring gene inner membrane complex protein 1k, putative Neighboring gene V-type proton ATPase subunit D, putative Neighboring gene aconitate hydratase Neighboring gene conserved Plasmodium membrane protein, unknown function

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004331.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine. Wong W, et al. Elife, 2014 Jun 9. PMID 24913268, Free PMC Article
    2. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article
    3. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
    4. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables structural constituent of ribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic small ribosomal subunit IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    40S ribosomal protein S6

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004331.3 Reference assembly

      Range
      1653211..1654131 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001350105.1 → XP_001350141.1  40S ribosomal protein S6 [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001350141.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024V1F7, A0A024VKH6, A0A024WKG4, A0A024X1T9, A0A0L7KAT9, Q8IDR9, W4IA21, W4IZW1, W7F6Y8, W7FIW0, W7J7L1, W7KAJ7
      Conserved Domains (1) summary
      cl00931
      Location:1 → 219
      Ribosomal_S6e; Ribosomal protein S6e
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    3J7A_H.1
    6OKK_H.1

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