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    Vamp3 vesicle-associated membrane protein 3 [ Mus musculus (house mouse) ]

    Gene ID: 22319, updated on 21-Dec-2016
    Official Symbol
    Vamp3provided by MGI
    Official Full Name
    vesicle-associated membrane protein 3provided by MGI
    Primary source
    MGI:MGI:1321389
    See related
    Ensembl:ENSMUSG00000028955 Vega:OTTMUSG00000010239
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    ceb; VAMP-3; D130027G05Rik
    Orthologs
    Location:
    4; 4 E2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 4 NC_000070.6 (151047305..151057953, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (150421414..150432062, complement)

    Chromosome 4 - NC_000070.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 30120 Neighboring gene uncharacterized LOC108169018 Neighboring gene period circadian clock 3 Neighboring gene urotensin 2 Neighboring gene predicted gene, 38529 Neighboring gene calmodulin binding transcription activator 1 Neighboring gene predicted gene 13090

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Products Interactant Other Gene Complex Source Pubs Description

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    SNAP receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    SNARE binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    SNARE binding ISO
    Inferred from Sequence Orthology
    more info
     
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    syntaxin-1 binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    Golgi to plasma membrane protein transport IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    SNARE complex assembly IDA
    Inferred from Direct Assay
    more info
    PubMed 
    calcium ion regulated exocytosis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    negative regulation of secretion by cell ISO
    Inferred from Sequence Orthology
    more info
     
    positive regulation of receptor recycling IDA
    Inferred from Direct Assay
    more info
    PubMed 
    protein complex assembly ISO
    Inferred from Sequence Orthology
    more info
     
    protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    retrograde transport, endosome to Golgi ISO
    Inferred from Sequence Orthology
    more info
     
    substrate adhesion-dependent cell spreading IDA
    Inferred from Direct Assay
    more info
    PubMed 
    transport IEA
    Inferred from Electronic Annotation
    more info
     
    vesicle-mediated transport IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    SNARE complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    SNARE complex ISO
    Inferred from Sequence Orthology
    more info
     
    apical plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    cell junction IEA
    Inferred from Electronic Annotation
    more info
     
    cell surface IDA
    Inferred from Direct Assay
    more info
    PubMed 
    clathrin-coated vesicle ISO
    Inferred from Sequence Orthology
    more info
     
    clathrin-coated vesicle membrane ISO
    Inferred from Sequence Orthology
    more info
     
    cytoplasmic vesicle IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    intracellular ISO
    Inferred from Sequence Orthology
    more info
     
    intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    intracellular organelle ISO
    Inferred from Sequence Orthology
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    neuron projection IEA
    Inferred from Electronic Annotation
    more info
     
    perinuclear region of cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    recycling endosome ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    secretory granule IDA
    Inferred from Direct Assay
    more info
    PubMed 
    synapse IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    vesicle-associated membrane protein 3
    Names
    cellubrevin
    synaptobrevin-3

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_009498.4NP_033524.1  vesicle-associated membrane protein 3

      See identical proteins and their annotated locations for NP_033524.1

      Status: PROVISIONAL

      Source sequence(s)
      AK051272
      Consensus CDS
      CCDS18979.1
      UniProtKB/Swiss-Prot
      P63024
      Related
      ENSMUSP00000030797, OTTMUSP00000010900, ENSMUST00000030797, OTTMUST00000023797
      Conserved Domains (2) summary
      cd15870
      Location:1779
      R-SNARE_VAMP2; SNARE motif of VAMP2
      pfam00957
      Location:1584
      Synaptobrevin; Synaptobrevin

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000070.6 Reference GRCm38.p4 C57BL/6J

      Range
      151047305..151057953 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCm38.p4 NOD/MrkTac

    Genomic

    1. NT_187025.1 Reference GRCm38.p4 NOD/MrkTac

      Range
      1352005..1362653 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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