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    ZNF189 zinc finger protein 189 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713873, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ZNF189provided by VGNC
    Official Full Name
    zinc finger protein 189provided by VGNC
    Primary source
    VGNC:VGNC:78861
    Locus tag
    EGK_07488
    See related
    Ensembl:ENSMMUG00000023795
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ZNF189 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (41476532..41488439, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (38164532..38176452, complement)

    Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 20 Neighboring gene post-GPI attachment to proteins GalNAc transferase 4 Neighboring gene aldolase, fructose-bisphosphate B Neighboring gene mitochondrial ribosomal protein L50 Neighboring gene UAP56-interacting factor-like Neighboring gene bile acid-CoA:amino acid N-acyltransferase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 189

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261609.1 → NP_001248538.1  zinc finger protein 189

      See identical proteins and their annotated locations for NP_001248538.1

      Status: PROVISIONAL

      Source sequence(s)
      JV043959
      UniProtKB/TrEMBL
      A0A8J8Y4R0, F7HT77, G7NEW9, H9EUL7
      Related
      ENSMMUP00000031338.4, ENSMMUT00000033484.4
      Conserved Domains (5) summary
      smart00349
      Location:14 → 68
      KRAB; krueppel associated box
      COG5048
      Location:141 → 524
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:346 → 366
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:14 → 53
      KRAB; KRAB box
      pfam13465
      Location:386 → 411
      zf-H2C2_2; Zinc-finger double domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041768.1 Reference Mmul_10 Primary Assembly

      Range
      41476532..41488439 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015117182.2 → XP_014972668.1  zinc finger protein 189 isoform X3

      Conserved Domains (3) summary
      COG5048
      Location:96 → 482
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:304 → 324
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:513 → 537
      zf-H2C2_2; Zinc-finger double domain

    2. XM_015117180.2 → XP_014972666.1  zinc finger protein 189 isoform X3

      Conserved Domains (3) summary
      COG5048
      Location:96 → 482
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:304 → 324
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:513 → 537
      zf-H2C2_2; Zinc-finger double domain

    3. XM_015117178.2 → XP_014972664.1  zinc finger protein 189 isoform X1

      UniProtKB/TrEMBL
      F7HT77
      Conserved Domains (5) summary
      smart00349
      Location:10 → 54
      KRAB; krueppel associated box
      COG5048
      Location:124 → 510
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:332 → 352
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:10 → 39
      KRAB; KRAB box
      pfam13465
      Location:372 → 397
      zf-H2C2_2; Zinc-finger double domain

    4. XM_015117179.2 → XP_014972665.1  zinc finger protein 189 isoform X2

      Conserved Domains (4) summary
      COG5048
      Location:126 → 509
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:331 → 351
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:11 → 38
      KRAB; KRAB box
      pfam13465
      Location:371 → 396
      zf-H2C2_2; Zinc-finger double domain

    5. XM_015117183.2 → XP_014972669.1  zinc finger protein 189 isoform X4

      UniProtKB/TrEMBL
      A0A1D5QGM8
      Conserved Domains (1) summary
      pfam01352
      Location:10 → 40
      KRAB; KRAB box
    Nucleotide Protein
    Heading Accession and Version

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