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    Pacrg PARK2 co-regulated [ Mus musculus (house mouse) ]

    Gene ID: 69310, updated on 27-Jun-2017
    Official Symbol
    Pacrgprovided by MGI
    Official Full Name
    PARK2 co-regulatedprovided by MGI
    Primary source
    MGI:MGI:1916560
    See related
    Ensembl:ENSMUSG00000037196 Vega:OTTMUSG00000031249
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1700008H23Rik
    Orthologs
    Location:
    17 A1; 17 7.8 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 17 NC_000083.6 (10403009..10840191, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 17 NC_000083.5 (10595878..11033057, complement)

    Chromosome 17 - NC_000083.6Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1700110C19 gene Neighboring gene RIKEN cDNA A230009B12 gene Neighboring gene predicted gene, 39565 Neighboring gene predicted gene 16168 Neighboring gene uncharacterized protein C3orf18 homolog pseudogene Neighboring gene predicted gene 16169 Neighboring gene Parkinson disease (autosomal recessive, juvenile) 2, parkin Neighboring gene predicted gene, 41526

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    G-protein coupled receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    Hsp70 protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    Hsp90 protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    actin binding ISO
    Inferred from Sequence Orthology
    more info
     
    alpha-tubulin binding ISO
    Inferred from Sequence Orthology
    more info
     
    beta-tubulin binding ISO
    Inferred from Sequence Orthology
    more info
     
    chaperone binding ISO
    Inferred from Sequence Orthology
    more info
     
    heat shock protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    ubiquitin protein ligase binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    ubiquitin protein ligase binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    cellular response to unfolded protein TAS
    Traceable Author Statement
    more info
    PubMed 
    negative regulation of cell death IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    negative regulation of cell death ISO
    Inferred from Sequence Orthology
    more info
     
    spermatid development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    cell body IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cilium IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    mitochondrion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    neuron projection IDA
    Inferred from Direct Assay
    more info
    PubMed 
    neuron projection ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    sperm midpiece IDA
    Inferred from Direct Assay
    more info
    PubMed 
    vesicle IDA
    Inferred from Direct Assay
    more info
    PubMed 
    vesicle ISO
    Inferred from Sequence Orthology
    more info
     
    Preferred Names
    parkin coregulated gene protein homolog
    Names
    PARK2 coregulated gene protein
    hypertension-related protein 1-like protein
    parkin co-regulated gene protein

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_027032.2NP_081308.1  parkin coregulated gene protein homolog

      See identical proteins and their annotated locations for NP_081308.1

      Status: VALIDATED

      Source sequence(s)
      AK005771, AK135510
      Consensus CDS
      CCDS28388.1
      UniProtKB/Swiss-Prot
      Q9DAK2
      UniProtKB/TrEMBL
      Q0VB91, Q3UXK4
      Related
      ENSMUSP00000044376.6, OTTMUSP00000040936, ENSMUST00000041463.6, OTTMUST00000077414
      Conserved Domains (2) summary
      pfam10274
      Location:54237
      ParcG; Parkin co-regulated protein
      cl21467
      Location:1954
      Cytochrom_C; Cytochrome c

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000083.6 Reference GRCm38.p4 C57BL/6J

      Range
      10403009..10840191 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006523353.3XP_006523416.1  parkin coregulated gene protein homolog isoform X1

      See identical proteins and their annotated locations for XP_006523416.1

      Conserved Domains (1) summary
      pfam10274
      Location:1135
      ParcG; Parkin co-regulated protein
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