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    Peli1 pellino 1 [ Mus musculus (house mouse) ]

    Gene ID: 67245, updated on 9-Jul-2017
    Official Symbol
    Peli1provided by MGI
    Official Full Name
    pellino 1provided by MGI
    Primary source
    MGI:MGI:1914495
    See related
    Ensembl:ENSMUSG00000020134 Vega:OTTMUSG00000005237
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AA409794; AI586297; D11Ertd676e; 2810468L03Rik; A930031K15Rik
    Orthologs
    Location:
    11 A3.1; 11 13.81 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 11 NC_000077.6 (21091324..21150327)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (20991327..21050330)

    Chromosome 11 - NC_000077.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 39608 Neighboring gene predicted gene, 46273 Neighboring gene predicted gene, 32293 Neighboring gene predicted gene, 40824 Neighboring gene ATP synthase subunit g, mitochondrial pseudogene Neighboring gene predicted gene 12040 Neighboring gene ribosomal protein, large, P0 pseudogene

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Products Interactant Other Gene Complex Source Pubs Description

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    ubiquitin protein ligase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    ubiquitin-protein transferase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Preferred Names
    E3 ubiquitin-protein ligase pellino homolog 1
    Names
    RING-type E3 ubiquitin transferase pellino homolog 1
    protein pellino homolog 1
    NP_075813.2
    XP_011242048.1

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_023324.2NP_075813.2  E3 ubiquitin-protein ligase pellino homolog 1

      See identical proteins and their annotated locations for NP_075813.2

      Status: VALIDATED

      Source sequence(s)
      AK152900, AL669979, AW124934
      Consensus CDS
      CCDS24462.1
      UniProtKB/Swiss-Prot
      Q8C669
      UniProtKB/TrEMBL
      Q5SRW7
      Related
      ENSMUSP00000090979.5, OTTMUSP00000005419, ENSMUST00000093290.11, OTTMUST00000011680
      Conserved Domains (1) summary
      pfam04710
      Location:10418
      Pellino; Pellino

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000077.6 Reference GRCm38.p4 C57BL/6J

      Range
      21091324..21150327
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011243746.1XP_011242048.1  E3 ubiquitin-protein ligase pellino homolog 1 isoform X1

      Conserved Domains (1) summary
      pfam04710
      Location:10352
      Pellino; Pellino
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