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    Zdhhc22 zinc finger, DHHC-type containing 22 [ Mus musculus (house mouse) ]

    Gene ID: 238331, updated on 31-Jan-2019

    Summary

    Official Symbol
    Zdhhc22provided by MGI
    Official Full Name
    zinc finger, DHHC-type containing 22provided by MGI
    Primary source
    MGI:MGI:2685108
    See related
    Ensembl:ENSMUSG00000048483
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm262
    Expression
    Biased expression in cortex adult (RPKM 9.7), frontal lobe adult (RPKM 6.5) and 5 other tissues See more
    Orthologs

    Genomic context

    See Zdhhc22 in Genome Data Viewer
    Location:
    12; 12 D2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 12 NC_000078.6 (86980763..86991156, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 12 NC_000078.5 (88324331..88329626, complement)

    Chromosome 12 - NC_000078.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 26698 Neighboring gene predicted gene, 32934 Neighboring gene CLOCK interacting protein, circadian Neighboring gene transmembrane protein 63c Neighboring gene crumbs homolog 1 pseudogene Neighboring gene neuroglobin

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Homology

    Clone Names

    • MGC157624

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    protein-cysteine S-palmitoyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    transferase activity, transferring acyl groups IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    peptidyl-L-cysteine S-palmitoylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    protein localization to plasma membrane IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    protein localization to plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    protein palmitoylation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    protein palmitoylation ISO
    Inferred from Sequence Orthology
    more info
     
    protein targeting to membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    Golgi apparatus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Golgi apparatus ISO
    Inferred from Sequence Orthology
    more info
     
    endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    palmitoyltransferase ZDHHC22
    Names
    DHHC-22
    putative palmitoyltransferase ZDHHC22
    zinc finger DHHC domain-containing protein 22
    NP_001074412.1
    XP_006515914.1
    XP_006515915.1
    XP_006515916.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001080943.2NP_001074412.1  palmitoyltransferase ZDHHC22

      See identical proteins and their annotated locations for NP_001074412.1

      Status: PROVISIONAL

      Source sequence(s)
      BC128021
      Consensus CDS
      CCDS36500.1
      UniProtKB/Swiss-Prot
      A0PK84
      Related
      ENSMUSP00000093177.2, ENSMUST00000095521.2
      Conserved Domains (1) summary
      pfam01529
      Location:91218
      zf-DHHC; DHHC palmitoyltransferase

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000078.6 Reference GRCm38.p4 C57BL/6J

      Range
      86980763..86991156 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006515852.3XP_006515915.1  palmitoyltransferase ZDHHC22 isoform X1

      See identical proteins and their annotated locations for XP_006515915.1

      UniProtKB/Swiss-Prot
      A0PK84
      Conserved Domains (1) summary
      pfam01529
      Location:91218
      zf-DHHC; DHHC palmitoyltransferase
    2. XM_006515851.2XP_006515914.1  palmitoyltransferase ZDHHC22 isoform X1

      See identical proteins and their annotated locations for XP_006515914.1

      UniProtKB/Swiss-Prot
      A0PK84
      Related
      ENSMUSP00000152660.1, ENSMUST00000222543.1
      Conserved Domains (1) summary
      pfam01529
      Location:91218
      zf-DHHC; DHHC palmitoyltransferase
    3. XM_006515853.3XP_006515916.1  palmitoyltransferase ZDHHC22 isoform X2

      Conserved Domains (1) summary
      pfam01529
      Location:91180
      zf-DHHC; DHHC palmitoyltransferase
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