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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_029387.2 RefSeqGene
- Range
-
4997..5726
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
-
NG_000002.1
- Range
-
223181..223916
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001303509.2 → NP_001290438.1 immunoglobulin iota chain isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate splice site in the coding region and initiates translation at an alternate start codon, compared to variant 1. The encoded isoform (2) has a distinct N-terminus and is shorter than isoform 1.
- Source sequence(s)
-
AC245060
- Consensus CDS
-
CCDS77657.1
- UniProtKB/TrEMBL
-
F8W8C9
- Conserved Domains (2) summary
-
- cd00096
Location:36 → 40
- Ig; Ig strand B [structural motif]
- cl11960
Location:21 → 117
- Ig; Immunoglobulin domain
-
NM_007128.4 → NP_009059.1 immunoglobulin iota chain isoform 1 precursor
See identical proteins and their annotated locations for NP_009059.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AC245060, BC017922, BG502270
- Consensus CDS
-
CCDS13798.1
- UniProtKB/Swiss-Prot
- B5MCG2, P12018
- Related
- ENSP00000385361.3, ENST00000403807.4
- Conserved Domains (2) summary
-
- smart00410
Location:26 → 116
- IG_like; Immunoglobulin like
- cl11960
Location:30 → 118
- Ig; Immunoglobulin domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000022.11 Reference GRCh38.p14 Primary Assembly
- Range
-
22244786..22245515
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060946.1 Alternate T2T-CHM13v2.0
- Range
-
22658325..22659054
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)